coding_sequence_variant
synonymous_variant
2011-06-24T03:38:30Z
A sequence variant where there is no resulting change to the encoded amino acid.
ANNOVAR:synonymous SNV
EBI term: Synonymous SNPs - In coding sequence, not resulting in an amino acid change (i.e. silent mutation).
This term is sometimes used synonomously with the more general term 'silent mutation', although a silent mutation may occur in non coding sequence. The best practice is to annotate to the most specific term.
EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html
Jannovar:synonymous_variant
SO:0001588
SO:0001819
Seattleseq:synonymous
Seattleseq:synonymous-near-splice
VAAST:synonymous_codon
VAAST:synonymous_variant
VAT:synonymous
VEP:synonymous_variant
coding-synon
http://en.wikipedia.org/wiki/Silent_mutation
http://en.wikipedia.org/wiki/Synonymous_mutation
http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp
http://snpeff.sourceforge.net/SnpEff_manual.html
http://vat.gersteinlab.org/formats.php
http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences
kareneilbeck
sequence
silent mutation
silent substitution
silent_mutation
snpEff:SYNONYMOUS_CODING
synonymous codon
synonymous_coding
synonymous_codon