Term IRI	Term label	Parent term IRI	Parent term label	Alternative term	Definition
http://purl.obolibrary.org/obo/OBCS_0000277	material difficult to obtain	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	材料难以获取	
http://purl.obolibrary.org/obo/OBI_0002465	age since culture seeding measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum	age of culture	An age measurement datum that is the result of the measurement of the age of a cell since cultured (the process of seeding cells onto a culture dish).
http://purl.obolibrary.org/obo/OBCS_0000278	instability of event (episodic, self-reversing, spreading)	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	事件不稳定（偶发、自我逆转、扩散）	
http://purl.obolibrary.org/obo/OBCS_0000279	partially available data	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	部分可用数据	
http://purl.obolibrary.org/obo/OBI_0002475	number of PCR cycles during library construction	http://purl.obolibrary.org/obo/IAO_0000027	data item	library construction PCR cycles	A data item that is the number of PCR cycles used during the construction of a sequencing library.
http://purl.obolibrary.org/obo/OBCS_0000280	diverse populations for study	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	研究人群不同	
http://purl.obolibrary.org/obo/OBI_0002479	sequence read length measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	read length, read length measurement datum	A measurement datum that is the result of the measurement of the number of bases in a DNA or RNA sequence.
http://purl.obolibrary.org/obo/OBCS_0000281	unclear boundaries of causal phenomena	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	因果现象界限不清	
http://purl.obolibrary.org/obo/OBI_0002480	sequencing library input quantity measurement datum	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum	library input amount	A scalar measurement datum that indicates the amount of sequencing library used as input for a sequencer.
http://purl.obolibrary.org/obo/OBCS_0000282	lack of causal model	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	缺乏因果模型	
http://purl.obolibrary.org/obo/OBCS_0000283	uncontrollable experimental condition	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不可控的实验条件	
http://purl.obolibrary.org/obo/OBI_0002482	specimen harvest quantity	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	harvest quantity	A scalar measurement datum that indicates the amount of specimen collected.
http://purl.obolibrary.org/obo/OBCS_0000284	lack of information for comparison	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	缺乏可供比较的信息	
http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module	subset ontology	An ontology module that is extracted from a main ontology module and includes only a subset of entities or axioms.
http://purl.obolibrary.org/obo/OBCS_0000285	labile and spreading symptom and side effect	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不稳定和不断扩散的症状和副作用	
http://purl.obolibrary.org/obo/OBI_0002992	prevalence of pathogen in specimens	http://purl.obolibrary.org/obo/IAO_0000027	data item	prevalence of pathogen	A data item that is the frequency of detection of a specified pathogenic organism in collected specimens.
http://purl.obolibrary.org/obo/OBCS_0000286	delayed information	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	延迟的信息	
http://purl.obolibrary.org/obo/OBCS_0000144	R squared value	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	coefficient of determination	A quantitative confidence value that indicates how well data points fit a statistical model - sometimes simply a line or curve. It is a statistic used in the context of statistical models whose main purpose is either the prediction of future outcomes or the testing of hypotheses, on the basis of other related information. It provides a measure of how well observed outcomes are replicated by the model, as the proportion of total variation of outcomes explained by the model.
http://purl.obolibrary.org/obo/OBCS_0000287	specialist/nonspecialist handling of the same case	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	同一案例的专业/非专业处理	
http://purl.obolibrary.org/obo/OBI_0002136	RNA Integrity Number calculation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	RIN calculation	A data transformation using the RIN algorithm to generate a quality measure of RNA based on features from an electrophoretic trace.
http://purl.obolibrary.org/obo/OBCS_0000288	unequal status between investigators	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	调查者间地位不平等	
http://purl.obolibrary.org/obo/OBI_0002137	RNA Integrity Number value specification	http://purl.obolibrary.org/obo/OBI_0001933	value specification	RIN value specification	A value specification that specifies the value of the RNA Integrity Number as a real value between 1 (most degraded) and 10 (most intact).
http://purl.obolibrary.org/obo/OBCS_0000289	poor management-staff relation	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	管理层与员工关系不佳	
http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	http://purl.obolibrary.org/obo/BFO_0000016	disposition	不确定性	A disposition that inheres in some objects, which prevents accurate prediction or determination of the quality of a material entity. It is realized in objective process or subjective process.
http://purl.obolibrary.org/obo/OBCS_0000290	lack of funding	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	资金不足	
http://purl.obolibrary.org/obo/OBCS_0000291	sporadic funding	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	资金分散	
http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	客观不确定性	An uncertainty that inheres in an objective continuant.
http://purl.obolibrary.org/obo/OBCS_0000292	lack of institutional security	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	缺乏制度保障	
http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	主观不确定性	An uncertainty that inheres in an organism (in especial human) and results from subjective cognition.
http://purl.obolibrary.org/obo/OBCS_0000293	delay and lack of communication between investigators	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	调查人员间的延误和缺乏沟通	
http://purl.obolibrary.org/obo/OBCS_0000254	subjective object	http://purl.obolibrary.org/obo/BFO_0000030	object	带有主观性的客体	An object with subjective cognition.
http://purl.obolibrary.org/obo/OBCS_0000295	operative complication (experimental)	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	手术并发症（实验性）	
http://purl.obolibrary.org/obo/OBCS_0000255	objective process	http://purl.obolibrary.org/obo/BFO_0000015	process	客观过程	A process in which tangible substances or objects undergo movement or change in a way that can be observed and measured independently, regardless of subjective interpretations or perceptions. It is a concept often used in scientific and objective contexts to describe the physical changes and movements of matter in the external world.
http://purl.obolibrary.org/obo/OBCS_0000296	uncontrollable procedure	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	无法控制的程序	
http://purl.obolibrary.org/obo/OBCS_0000256	subjective process	http://purl.obolibrary.org/obo/BFO_0000015	process	主观过程	A process refers to the mental processes involved in gaining knowledge and comprehension. Some of the many different cognitive processes include thinking, knowing, remembering, judging, and problem-solving.
http://purl.obolibrary.org/obo/OBCS_0000297	observational difficulty	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	观察困难	
http://purl.obolibrary.org/obo/OBCS_0000259	sensitivity analysis	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	灵敏度分析	Study of how the uncertainty in the output of a mathematical model or system (numerical or otherwise) can be divided and allocated to different sources of uncertainty in its inputs.Conducted to understand the factors and processes that most (or least) control a model’s outputs 
http://purl.obolibrary.org/obo/OBCS_0000298	order data sequentially or by spatial location	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	按顺序或空间位置对数据进行排序	
http://purl.obolibrary.org/obo/OBCS_0000260	local sensitivity analysis	http://purl.obolibrary.org/obo/OBCS_0000259	sensitivity analysis	局部灵敏度分析	Model evaluation performed by varying uncertain factors around specific reference values.
http://purl.obolibrary.org/obo/OBCS_0000299	standardize	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	标准化	
http://purl.obolibrary.org/obo/OBCS_0000261	global sensitivity analysis	http://purl.obolibrary.org/obo/OBCS_0000259	sensitivity analysis	全局灵敏度分析	Model evaluation performed by varying uncertain factors throughout their entire feasible value space.
http://purl.obolibrary.org/obo/OBCS_0000300	find exemplars-filter for clear-cut case	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	范例筛选	
http://purl.obolibrary.org/obo/OBCS_0000263	error propagation equation	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	误差传播方程	Equations aimed to assess how the quantified uncertainties in model  inputs propagate in model calculations to produce and uncertainty range in a given model  outcome of interest.In statistics, propagation of uncertainty (or propagation of error) is the effect of variables' uncertainties (or errors, more specifically random errors) on the uncertainty of a function based on them. When the variables are the values of experimental measurements they have uncertainties due to measurement limitations (e.g., instrument precision) which propagate due to the combination of variables in the function.
http://purl.obolibrary.org/obo/OBCS_0000301	segmentation of uncertainty	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	不确定性分割	
http://purl.obolibrary.org/obo/OBCS_0000268	Pluralistic fRamework of Integrated uncertainty Management and risk Analysis	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	综合不确定性管理和风险分析的多元框架	A meta approach (organising  framework) to structure the process of uncertainty management
http://purl.obolibrary.org/obo/OBCS_0000302	substitution of taxonomy for diagnosis	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	诊断分类替代	
http://purl.obolibrary.org/obo/OBCS_0000269	Checklist for Model Quality Assistance	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	模型质量协助清单	An instrument for internal use to assist  modellers and users of models in the process of quality control.
http://purl.obolibrary.org/obo/OBCS_0000303	division of labor	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	劳动分工	
http://purl.obolibrary.org/obo/OBCS_0000304	search for pathognomonic sign	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	寻找病症	
http://purl.obolibrary.org/obo/OBCS_0000270	critical review of assumptions in model	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	模型中假设的批判性审查	A method that enables to systematically identify and prioritize critical assumptions in (chains of linked) models and provides a framework for the critical appraisal of model assumptions.This method aims to systematically identify, prioritise and analyse importance and strength of assumptions in models.
http://purl.obolibrary.org/obo/OBCS_0000305	shotgun treatment	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	散弹枪疗法	
http://purl.obolibrary.org/obo/OBCS_0000274	rarity of event	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	事件罕见	Rare or extreme events are events that occur with low frequency, and often refers to infrequent events that have a widespread effect and which might destabilize systems
http://purl.obolibrary.org/obo/OBCS_0000306	division of data along political line for clarity	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	按照政治路线清晰划分数据	
http://purl.obolibrary.org/obo/OBCS_0000319	inherent randomness of nature	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	自然固有的随机性	the chaotic and unpredictable nature of natural processes
http://purl.obolibrary.org/obo/OBCS_0000307	division of labor along technical/substantive line	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	按照技术/实质性原则分工	
http://purl.obolibrary.org/obo/OBCS_0000320	behavioural variability	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	行为可变性	‘non-rational’behaviour, discrepancies between what people say and what they actually do (cognitive dissonance), or deviations of ‘standard’ behavioural patterns (micro-level behaviour).
http://purl.obolibrary.org/obo/OBCS_0000308	observations limited to available material	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	观察限于现有材料	
http://purl.obolibrary.org/obo/OBCS_0000321	societal variability	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	社会可变性	the chaotic and unpredictable nature of societal  processes (macro-level behaviour). The need to consider  societal and institutional processes as a major contributor  to uncertainty due to variability can be inferred from  various papers of Funtowicz, Ravetz, and de Marchi.
http://purl.obolibrary.org/obo/OBCS_0000309	utilitarian emphasis on practical result	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	强调实际结果的功利主义	
http://purl.obolibrary.org/obo/OBCS_0000323	sampling error in the measurement	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	抽样误差	Sampling error is the error associated with the degree to which the sample is representative.
http://purl.obolibrary.org/obo/OBCS_0000310	standardization of techniques and material	http://purl.obolibrary.org/obo/OBCS_0000299	standardize	技术和材料标准化	
http://purl.obolibrary.org/obo/OBCS_0000326	vagueness	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	模糊	vagueness is associated with the lack of precise or sharp distinctions or boundaries
http://purl.obolibrary.org/obo/OBCS_0000311	standardization of observational technique (form) and protocol	http://purl.obolibrary.org/obo/OBCS_0000299	standardize	观察技术（形式）和协议标准化	
http://purl.obolibrary.org/obo/OBCS_0000327	ambiguity	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	歧义	Ambiguity, on the other hand, is associated with one-to-many relations, that is, situations in which several alternatives are left unspecified or a desired categorization of an element is left undecided due to ignorance.
http://purl.obolibrary.org/obo/OBCS_0000312	observations down-focused to smaller area	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	观察向下聚焦到更小的领域	
http://purl.obolibrary.org/obo/OBCS_0000328	taxonomic uncertainty	http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	分类不确定性	Taxonomic uncertainty arose as they tried to develop classification systems (for example, what kind of thing was epilepsy?).
http://purl.obolibrary.org/obo/OBCS_0000329	diagnostic uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	诊断不确定性	Diagnostic uncertainty arose when investigators attempted to fit a particular case into their taxonomies.
http://purl.obolibrary.org/obo/OBCS_0000313	substitution of theoretical validity for technical consistency	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	用理论有效性替代技术一致性	
http://purl.obolibrary.org/obo/OBCS_0000330	organizational uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	组织不确定性	Organizational uncertainty arose when information was lost or trapped owing to the local division of labor or the circumstances of alliances and collaborations. 
http://purl.obolibrary.org/obo/OBCS_0000314	measurement error	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	测量误差	
http://purl.obolibrary.org/obo/OBCS_0000331	technical uncertainty	http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	技术不确定性	Technical uncertainty developed as a result of inadequate tools or ambiguous information about techniques. Technical uncertainty arose from difficulties with subjects, equipment, and procedures, including the lack of standard  measurement techniques. 
http://purl.obolibrary.org/obo/OBCS_0000315	incomplete knowledge	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不完整的知识	
http://purl.obolibrary.org/obo/OBCS_0000338	determinism	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	决定论	Determinism is the ideal situation in which we know everything precisely. It is not attainable, but acts as a limiting characteristic at one end of the spectrum.
http://purl.obolibrary.org/obo/OBCS_0000339	statistical uncertainty	http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	统计不确定性	Statistical uncertainty is any uncertainty that can be  described adequately in statistical terms. Statistical uncertainty can apply to any location in the model, even to model structure uncertainties, as long as the deviation from the true value can be characterised statistically.Statistical uncertainty is what is usually referred to as‘‘uncertainty’’in the natural sciences.
http://purl.obolibrary.org/obo/OBCS_0000340	measurement uncertainty	http://purl.obolibrary.org/obo/OBCS_0000339	statistical uncertainty	测量不确定性	Measurement uncertainty stems from the fact that measurements can practically never precisely represent the ‘‘true’’ value of that which is being measured.
http://purl.obolibrary.org/obo/OBCS_0000341	scenario uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	情景不确定性	Scenario uncertainty can manifest itself in various ways –  for example, (a) as a range in the outcomes of an analysis  due to different underlying assumptions, (b) as uncertainty  about which changes and developments (e.g., in driving  forces or in system characteristics) are relevant for the  outcomes of interest, or (c) as uncertainty about the levels of  these relevant changes.
http://purl.obolibrary.org/obo/OBCS_0000342	recognized ignorance	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	公认的无知	Recognised ignorance is fundamental uncertainty about  the mechanisms and functional relationships being studied. We know neither the functional relationships nor the  statistical properties and the scientific basis for developing  scenarios is weak.
http://purl.obolibrary.org/obo/OBCS_0000316	limited understanding	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	有限的理解	
http://purl.obolibrary.org/obo/OBCS_0000343	reducible ignorance	http://purl.obolibrary.org/obo/OBCS_0000342	recognized ignorance	可还原的无知	Reducible  ignorance may be resolved by conducting further research,  which implies that it might be possible to somehow achieve a  better understanding. 
http://purl.obolibrary.org/obo/OBCS_0000344	irreducible ignorance	http://purl.obolibrary.org/obo/OBCS_0000342	recognized ignorance	不可还原的无知	Irreducible ignorance applies when neither research nor development can provide sufficient knowledge about the essential relationships. 
http://purl.obolibrary.org/obo/OBCS_0000317	imperfect model	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不完美的模型	
http://purl.obolibrary.org/obo/OBCS_0000318	subjective judgement	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	主观判断	
http://purl.obolibrary.org/obo/OBCS_0000345	total ignorance	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	完全无知	Total ignorance is the other extreme from determinism on the scale of uncertainty, which implies a deep level of uncertainty, to the extent that we do not even know that we do not know. 
http://purl.obolibrary.org/obo/OBCS_0000324	probability	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	可能	
http://purl.obolibrary.org/obo/OBCS_0000346	context uncertainty	http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	场景不确定性	Context uncertainty includes uncertainty about the external economic, environmental, political, social, and technological situation that forms the context for the problem being examined. The context could fall within the past, the present, or the future. 
http://purl.obolibrary.org/obo/OBCS_0000325	complexity-induced uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	复杂引起的不确定性	
http://purl.obolibrary.org/obo/OBCS_0000347	model uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	模型不确定性	Model uncertainty is associated with both the conceptual model (i.e., the variables and their relationships that are chosen to describe the system located within the boundaries and thus constituting the model complex) and the computer model.
http://purl.obolibrary.org/obo/OBCS_0000332	prognosis uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	预后不确定性	
http://purl.obolibrary.org/obo/OBCS_0000348	model structure uncertainty	http://purl.obolibrary.org/obo/OBCS_0000347	model uncertainty	模型结构不确定性	uncertainty about the form of the model itself. Model structure uncertainty arises from a lack of sufficient understanding of the system (past, present, or future) that is the subject of the policy analysis, including the behaviour of the system and the interrelationships among its elements.
http://purl.obolibrary.org/obo/OBCS_0000333	positive or neutral certainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	确定性（正面或中性）	
http://purl.obolibrary.org/obo/OBCS_0000349	model technical uncertainty	http://purl.obolibrary.org/obo/OBCS_0000347	model uncertainty	模型技术不确定性	uncertainty arising from the computer implementation of the model.Model technical uncertainty is the uncertainty generated  by software or hardware errors, i.e. hidden flaws in the  technical equipment. Software errors arise from bugs in  software, design errors in algorithms and typing errors in  model source code. Hardware errors arise from bugs, such as  the bug in the early version of the Pentium processor, which gave rise to numerical error in a broad range of floating-point calculations performed on the processor.
http://purl.obolibrary.org/obo/OBCS_0000334	detrimental certainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	确定性（有害的）	
http://purl.obolibrary.org/obo/OBCS_0000351	external driving forces uncertainty	http://purl.obolibrary.org/obo/OBCS_0000350	input uncertainty	外部驱动力量不确定性	Uncertainty about the external driving forces that produce changes within the system (the relevant scenario variables and policy variables) and the magnitude of the forces (the values of the scenario and policy variables). 
http://purl.obolibrary.org/obo/OBCS_0000335	moderate degree of certainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	中等不确定性	
http://purl.obolibrary.org/obo/OBCS_0000352	system data uncertainty	http://purl.obolibrary.org/obo/OBCS_0000350	input uncertainty	系统数据不确定性	Uncertainty about the systemdata that ‘drive’ themodel and typically quantify relevant features of the reference system and its behaviour (e.g. land-use maps, data on infrastructure (roads, houses)). Uncertainty about system data is generated by a lack of knowledge of the properties (including both the deterministic and the stochastic properties) of the underlying system and deficiencies in the description of the variability that can be an inherent feature of some of the phenomena under observation. 
http://purl.obolibrary.org/obo/OBCS_0000336	detrimental uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	不确定性（有害的）	
http://purl.obolibrary.org/obo/OBCS_0000354	model outcome uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	模型产出不确定性	This is the accumulated uncertainty caused by the uncertainties in all of the above locations (context, model, inputs, and parameters) that are propagated through the model and are reflected in the resulting estimates of the outcomes of interest.
http://purl.obolibrary.org/obo/OBCS_0000337	positive uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	不确定性（正面）	
http://purl.obolibrary.org/obo/OBCS_0000355	scientific uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	科学不确定性	Scientific uncertainty refers to uncertainty which emanates from the scientific and technical dimensions of a problem as opposed to the legal, moral, societal, institutional, proprietary, and situational dimensions outlined by De Marchi et al. Scientific uncertainty is intrinsic to the processes of risk assessment and forecasting.
http://purl.obolibrary.org/obo/OBCS_0000350	input uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	输入不确定性	
http://purl.obolibrary.org/obo/OBCS_0000356	legal uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	法律不确定性	Legal uncertainty is relevant "wherever agents must consider future contingencies of personal liability for their actions (or inactions)". High legal uncertainty can result in defensive responses in regard to both decision making and release of information. Legal uncertainty may also play a role where actions are conditioned on the clarity or otherwise of a legal framework in allowing one to predict the consequences of particular actions.
http://purl.obolibrary.org/obo/OBCS_0000353	parameters uncertainty	http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	参数不确定性	
http://purl.obolibrary.org/obo/OBCS_0000357	moral uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	道德不确定性	Moral uncertainty stems from the underlying moral issues related to action and inaction in any given case. De Marchi notes that, though similar to legal responsibility, moral guilt may occur absent legal responsibility when negative consequences might have been limited by the dissemination of prior information or more effective management for example. "Moral uncertainty is linked to the ethical tradition of a given country be it or not enacted in legislation (juridical and societal norms, shared moral values, mores), as well as the psychological characteristics of persons in charge, their social status and professional roles" (De Marchi, 1994). Moral uncertainty would typically be high when moral and ethical dimensions of an issue are central and participants have a range of understandings of the moral imperatives at stake.
http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	identity disorder	
http://purl.obolibrary.org/obo/OBCS_0000358	societal uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	社会不确定性	Communities from one region to another may differ in the set of norms, values, and manner of relating characteristic of their societies. This in turn can result in differences in approach to decision making and assessment. Some salient characteristics of these differences will be different views about the role of consensus versus conflict, on locating responsibility between individuals and larger groups, on views about the legitimacy and role of social and private institutions, and on attitudes to authority and expertise. From De Marchi (1994). Societal uncertainty would typically be high when decisions involve substantial collaboration among groups characterized by divergent decision making styles.
http://purl.obolibrary.org/obo/OBCS_0000368	definitive certainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	绝对确定	
http://purl.obolibrary.org/obo/OBCS_0000359	institutional uncertainty	http://purl.obolibrary.org/obo/OBCS_0000358	societal uncertainty	机制不确定性	Institutional uncertainty is in some sense a subset of societal uncertainty, and refers more specifically to the role and actions of institutions and their members. Institutional uncertainty stems from the "diverse cultures and traditions, divergent missions and values, different structures, and work styles among personnel of different agencies" (De Marchi, 1994). High institutional uncertainty can hinder collaboration or understanding among agencies, and can make the actions of institutions difficult to predict.
http://purl.obolibrary.org/obo/OBCS_0000369	high certainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	高度确定	
http://purl.obolibrary.org/obo/OBCS_0000360	proprietary uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	所有权不确定性	Proprietary uncertainty occurs due to the fact that information and knowledge about an issue are not uniformly shared among all those who could potentially use it. That is, some people or groups have information that others don't and may assert ownership or control over it. "Proprietary uncertainty becomes most salient when it is necessary to reconcile the general needs for safety, health, and environment protection with more sectorial needs pertaining, for instance, to industrial production and process, or to licensing and control procedures" (De Marchi, 1994). De Marchi notes that 'whistle blowing' is another source of proprietary uncertainty in that there is a need for protection of those who act in sharing information for the public good. Proprietary uncertainty would typically be high when knowledge plays a key role in assessment, but is not widely shared among participants. An example of such would be the case of external safety of military nuclear production facilities.
http://purl.obolibrary.org/obo/OBCS_0000361	situational uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	情境不确定性	Situational uncertainty relates to "the predicament of the person responsible for a crisis, either in the phase of preparation and planning, or of actual emergency. It refers to individual behaviours or personal interventions in crisis situations" (De Marchi, 1994) and as such represents a form of integration over the other six types of uncertainty. That is, it tends to combine the uncertainties one has to face in a given situation or on a particular issue. High situational uncertainty would be characterized by situations where individual decisions play a substantial role and there is uncertainty about the nature of those decisions.
http://purl.obolibrary.org/obo/OBCS_0000370	intermediate certainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	中度确定	
http://purl.obolibrary.org/obo/OBCS_0000362	psychological uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	心理不确定性	A belief is psychologically certain when the subject who has it is supremely convinced of its truth. Certainty in this sense is similar to incorrigibility, which is the property a belief has of being such that the subject is incapable of giving it up. But psychological certainty is not the same thing as incorrigibility. A belief can be certain in this sense without being incorrigible; this may happen, for example, when the subject receives a very compelling bit of counterevidence to the (previously) certain belief and gives it up for that reason. Moreover, a belief can be incorrigible without being psychologically certain. For example, a mother may be incapable of giving up the belief that her son did not commit a gruesome murder, and yet, compatible with that inextinguishable belief, she may be tortured by doubt. 
http://purl.obolibrary.org/obo/OBCS_0000371	highest uncertainty degree	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	最高程度不确定	
http://purl.obolibrary.org/obo/OBCS_0000375	uncertainty quantification	http://purl.obolibrary.org/obo/OBI_0000011	planned process	不确定性量化	Representation of model output uncertainty using probability distributions.
http://purl.obolibrary.org/obo/OBCS_0000372	very high uncertainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	非常高度不确定	
http://purl.obolibrary.org/obo/IAO_0000005	objective specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	goal specification	A directive information entity that describes an intended process endpoint. When part of a plan specification the concretization is realized in a planned process in which the bearer tries to effect the world so that the process endpoint is achieved.
http://purl.obolibrary.org/obo/OBCS_0000373	low uncertainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	低程度不确定	
http://purl.obolibrary.org/obo/IAO_0000027	data item	http://purl.obolibrary.org/obo/IAO_0000030	information content entity	data	An information content entity that is intended to be a truthful statement about something (modulo, e.g., measurement precision or other systematic errors) and is constructed/acquired by a method which reliably tends to produce (approximately) truthful statements.
http://purl.obolibrary.org/obo/OBCS_0000374	very low uncertainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	非常低程度不确定	
http://purl.obolibrary.org/obo/IAO_0000100	data set	http://purl.obolibrary.org/obo/IAO_0000027	data item	data list	A data item that is an aggregate of other data items of the same type that have something in common. Averages and distributions can be determined for data sets.
http://purl.obolibrary.org/obo/BFO_0000148	zero-dimensional temporal region	http://purl.obolibrary.org/obo/BFO_0000008	temporal region	temporal instant.	
http://purl.obolibrary.org/obo/IAO_8000000	ontology module	http://purl.obolibrary.org/obo/IAO_0000102	data about an ontology part	ontology file	
http://purl.obolibrary.org/obo/IAO_0000184	scatter plot	http://purl.obolibrary.org/obo/IAO_0000038	graph	scattergraph	A scatterplot is a graph which uses Cartesian coordinates to display values for two variables for a set of data. The data is displayed as a collection of points, each having the value of one variable determining the position on the horizontal axis and the value of the other variable determining the position on the vertical axis.
http://purl.obolibrary.org/obo/IAO_8000017	ontology module subsetted by expressivity	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module		
http://purl.obolibrary.org/obo/IAO_0000300	textual entity	http://purl.obolibrary.org/obo/IAO_0000030	information content entity	text	A textual entity is a part of a manifestation (FRBR sense), a generically dependent continuant whose concretizations are patterns of glyphs intended to be interpreted as words, formulas, etc.
http://purl.obolibrary.org/obo/OBCS_0000262	screening sensitivity analysis	http://purl.obolibrary.org/obo/OBCS_0000259	sensitivity analysis		
http://purl.obolibrary.org/obo/IAO_0000573	line graph	http://purl.obolibrary.org/obo/IAO_0000038	graph	line chart	A line graph is a type of graph created by connecting a series of data
points together with a line.
http://purl.obolibrary.org/obo/OBCS_0000294	reacting subject	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition		
http://purl.obolibrary.org/obo/IAO_0000584	time sampled measurement data set	http://purl.obolibrary.org/obo/IAO_0000100	data set	experimental time series	A data set that is an aggregate of data recording some measurement at a number of time points. The time series data set is an ordered list of pairs of time measurement data and the corresponding measurement data acquired at that time.
http://purl.obolibrary.org/obo/OBCS_0000364	uncertainty about gender role	http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty		
http://purl.obolibrary.org/obo/OBCS_0000365	uncertainty about long-term goal	http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty		
http://purl.obolibrary.org/obo/OBI_0000023	classified data set	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	data set with assigned class labels	A data set that is produced as the output of a class prediction data transformation and consists of a data set with assigned class labels.
http://purl.obolibrary.org/obo/OBCS_0000366	uncertainty about value system	http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty		
http://purl.obolibrary.org/obo/OBI_0000070	assay	http://purl.obolibrary.org/obo/OBI_0000011	planned process	scientific observation	A planned process that has the objective to produce information about a material entity (the evaluant) by examining it.
http://purl.obolibrary.org/obo/BFO_0000008	temporal region	http://purl.obolibrary.org/obo/BFO_0000003	occurrent		
http://purl.obolibrary.org/obo/OBI_0000086	reagent role	http://purl.obolibrary.org/obo/BFO_0000023	role	reagent	A role inhering in a biological or chemical entity that is intended to be applied in a scientific technique to participate (or have molecular components that participate) in a chemical reaction that facilitates the generation of data about some entity distinct from the bearer, or the generation of some specified material output distinct from the bearer.
http://purl.obolibrary.org/obo/BFO_0000011	spatiotemporal region	http://purl.obolibrary.org/obo/BFO_0000003	occurrent		
http://purl.obolibrary.org/obo/OBI_0000094	material processing	http://purl.obolibrary.org/obo/OBI_0000011	planned process	material transformation	A planned process which results in physical changes in a specified input material
http://purl.obolibrary.org/obo/OBI_0000392	information processor function	http://purl.obolibrary.org/obo/BFO_0000034	function	data processor function	An information processor function is a function that converts information from one form to another, by a lossless process or an extraction process.
http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity	http://purl.obolibrary.org/obo/BFO_0000004	independent continuant		
http://purl.obolibrary.org/obo/OBI_0000423	extract	http://purl.obolibrary.org/obo/OBI_0000047	processed material	extracted material	an extract is a material entity which results from an extraction process
http://purl.obolibrary.org/obo/BFO_0000009	two-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/OBI_0000456	material transformation objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification	artifact  creation objective	an objective specifiction that creates an specific output object from input materials.
http://purl.obolibrary.org/obo/BFO_0000018	zero-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/OBI_0000566	NMR instrument	http://purl.obolibrary.org/obo/OBI_0000832	measurement device	magnetic resonance imaging scanner	An Instrument which is used to carry out a NMR analysis of some sample.
http://purl.obolibrary.org/obo/BFO_0000026	one-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/OBI_0000634	DNA methylation profiling assay	http://purl.obolibrary.org/obo/OBI_0002020	epigenetic modification assay	DNA methylation profiling	An assay that measures the state of methylation of DNA molecules using genomic DNA collected from a material entity using a range of techniques and instrument such as DNA sequencers and often relying on treatment with bisulfites to ensure cytosine conversion.
http://purl.obolibrary.org/obo/OBI_0000648	clustered data set	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	data set with assigned discovered class labels	A data set that is produced as the output of a class discovery data transformation and consists of a data set with assigned discovered class labels.
http://purl.obolibrary.org/obo/BFO_0000028	three-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/OBI_0000658	data representational model	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	data structure specification	Data representational model is an information content entity of the  relationships between data items. A data representational model is encoded in a data format specification such as for cytoscape or biopax.
http://purl.obolibrary.org/obo/BFO_0000038	one-dimensional temporal region	http://purl.obolibrary.org/obo/BFO_0000008	temporal region		
http://purl.obolibrary.org/obo/OBI_0000659	specimen collection process	http://purl.obolibrary.org/obo/OBI_0000011	planned process	specimen collection	A planned process with the objective of collecting a specimen.
http://purl.obolibrary.org/obo/BFO_0000182	history	http://purl.obolibrary.org/obo/BFO_0000015	process		
http://purl.obolibrary.org/obo/BFO_0000034	function	http://purl.obolibrary.org/obo/BFO_0000016	disposition		
http://purl.obolibrary.org/obo/OBI_0000663	class prediction data transformation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	supervised classification data transformation	A class prediction data transformation (sometimes called supervised classification) is a data transformation that has objective class prediction.
http://purl.obolibrary.org/obo/BFO_0000016	disposition	http://purl.obolibrary.org/obo/BFO_0000017	realizable entity		
http://purl.obolibrary.org/obo/OBI_0000674	center value	http://purl.obolibrary.org/obo/OBCS_0000219	derived data from descriptive statistical analysis	median	A data item that is produced as the output of a center calculation data transformation and represents the center value of the input data.
http://purl.obolibrary.org/obo/BFO_0000019	quality	http://purl.obolibrary.org/obo/BFO_0000020	specifically dependent continuant		
http://purl.obolibrary.org/obo/OBI_0000675	statistical hypothesis test objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	hypothesis test objective	is a data transformation objective where the aim is to estimate statistical significance with the aim of proving or disproving a hypothesis by means of some data transformation.
http://purl.obolibrary.org/obo/BFO_0000024	fiat object part	http://purl.obolibrary.org/obo/BFO_0000040	material entity		
http://purl.obolibrary.org/obo/OBI_0000679	average value	http://purl.obolibrary.org/obo/OBCS_0000219	derived data from descriptive statistical analysis	arithmetic mean	A  data item that is produced as the output of an averaging data transformation and represents the average value of the input data.
http://purl.obolibrary.org/obo/OBI_0000700	support vector machine	http://purl.obolibrary.org/obo/OBI_0000663	class prediction data transformation	SVM	A support vector machine is a data transformation with a class prediction objective based on the construction of a separating hyperplane that maximizes the margin between two data sets of vectors in n-dimensional space.
http://purl.obolibrary.org/obo/BFO_0000027	object aggregate	http://purl.obolibrary.org/obo/BFO_0000040	material entity		
http://purl.obolibrary.org/obo/OBI_0000701	self-organizing map	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	SOM	A self-organizing map (SOM) is an artificial neural network with objective class discovery that uses a neighborhood function to preserve the topological properties of a dataset to produce low-dimensional (typically 2) discretized representation of the training data set. A set of artificial neurons learn to map points in an input space to coordinates in an output space. The input space can have different dimensions and topology from the output space, and the SOM will attempt to preserve these.
http://purl.obolibrary.org/obo/BFO_0000030	object	http://purl.obolibrary.org/obo/BFO_0000040	material entity		
http://purl.obolibrary.org/obo/OBI_0000727	k-nearest neighbors	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	k-NN	A k-nearest neighbors is a data transformation which achieves a class discovery or partitioning objective, in which an input data object with vector y is assigned to a class label based upon the k closest training data set points to y; where k is the largest value that class label is assigned.
http://purl.obolibrary.org/obo/BFO_0000142	one-dimensional continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary		
http://purl.obolibrary.org/obo/OBI_0000747	material sample	http://purl.obolibrary.org/obo/OBI_0100051	specimen	sample population	A material entity that has the material sample role
http://purl.obolibrary.org/obo/BFO_0000146	two-dimensional continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary		
http://purl.obolibrary.org/obo/OBI_0000749	CART	http://purl.obolibrary.org/obo/OBI_0000707	decision tree building data transformation	classification and regression trees	A CART (classification and regression trees) is a data transformation method for producing a classification or regression model with a tree-based structure.
http://purl.obolibrary.org/obo/BFO_0000147	zero-dimensional continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary		
http://purl.obolibrary.org/obo/OBI_0000750	study design independent variable	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	independent variable	a directive information entity that is part of a study design. Independent variables are entities whose values are selected to determine its relationship to an observed phenomenon (the dependent variable). In such an experiment, an attempt is made to find evidence that the values of the independent variable determine the values of the dependent variable (that which is being measured). The independent variable can be changed as required, and its values do not represent a problem requiring explanation in an analysis, but are taken simply as given. The dependent variable on the other hand, usually cannot be directly controlled
http://purl.obolibrary.org/obo/BFO_0000006	spatial region	http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity		
http://purl.obolibrary.org/obo/OBI_0000751	study design dependent variable	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	dependent variable	dependent variable specification is part of a study design. The dependent variable is the event studied and expected to change when the independent variable varies.
http://purl.obolibrary.org/obo/BFO_0000029	site	http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity		
http://purl.obolibrary.org/obo/OBI_0000791	multiple testing correction objective	http://purl.obolibrary.org/obo/OBI_0200186	error correction objective	multiple comparison correction objective	A multiple testing correction objectives is a data transformation objective where the aim is to correct for a set of statistical inferences considered simultaneously
http://purl.obolibrary.org/obo/UO_0000001	length unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/OBI_0000801	spike train datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	spike train measurement	A measurement datum which represents information about an ordered series of action potentials in an organism's CNS measured over time.
http://purl.obolibrary.org/obo/UO_0000002	mass unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/UO_0000003	time unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/OBI_0000938	categorical measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	nominal mesurement datum	A measurement datum that is reported on a categorical scale.
http://purl.obolibrary.org/obo/UO_0000005	temperature unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/UO_0000051	concentration unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	http://purl.obolibrary.org/obo/IAO_0000027	data item		
http://purl.obolibrary.org/obo/OBI_0000968	device	http://purl.obolibrary.org/obo/OBI_0000047	processed material	instrument	A material entity that is designed to perform a function in a scientific investigation, but is not a reagent.
http://purl.obolibrary.org/obo/IAO_0000057	contour plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		
http://purl.obolibrary.org/obo/OBI_0000970	scalar score from composite inputs	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item	questionaire score	A measurement datum which is the result of combining multiple datum. For example, a mean or summary score.
http://purl.obolibrary.org/obo/OBI_0001171	half life datum (t 1/2)	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum	t 1/2	The time it takes for 50% of a class of stochastic processes to occur.
http://purl.obolibrary.org/obo/IAO_0000582	time stamped measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		
http://purl.obolibrary.org/obo/NCBITaxon_10239	Viruses	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/OBI_0001442	q-value	http://purl.obolibrary.org/obo/OBI_0000662	error corrected data set	FDR adjusted p-value	A quantitative confidence value that measures the minimum false discovery rate that is incurred when calling that test significant. 
To compute q-values, it is necessary to know the p-value produced by a test and possibly set a false discovery rate level.
http://purl.obolibrary.org/obo/NCBITaxon_2157	Archaea	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism	http://purl.obolibrary.org/obo/OBI_0100051	specimen	tissue specimen	A specimen that derives from an anatomical part or substance arising from an organism. Examples of tissue specimen include tissue, organ, physiological system, blood, or body location (arm).
http://purl.obolibrary.org/obo/NCBITaxon_2	Bacteria	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/OBI_0001508	sampling time measurement datum	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum	time point	A time measurement datum when an observation is made or a sample is taken from a material as measured from some reference point.
http://purl.obolibrary.org/obo/NCBITaxon_2759	Eukaryota	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/OBI_0001566	50% dissociation of binding temperature (Tm)	http://purl.obolibrary.org/obo/OBI_0003142	quantitative binding datum	melting temperature (Tm)	A quantitative binding datum that specifies the temperature at which half of the binding partners are forming a complex and the other half are unbound.
http://purl.obolibrary.org/obo/OBCS_0000020	hierarchical linear model	http://purl.obolibrary.org/obo/OBCS_0000035	statistical model		
http://purl.obolibrary.org/obo/OBI_0001619	specimen collection time measurement datum	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum	collection date	A time measurement datum that is the measure of the time when the specimens are collected.
http://purl.obolibrary.org/obo/UBERON_0013522	subdivision of tube	http://purl.obolibrary.org/obo/UBERON_0000064	organ part		
http://purl.obolibrary.org/obo/OBI_0001620	latitude coordinate measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	latitude	A measurement datum that is the measure of the latitude coordinate of a site.
http://purl.obolibrary.org/obo/IAO_8000016	taxonomic bridge ontology module	http://purl.obolibrary.org/obo/IAO_8000004	bridge ontology module		
http://purl.obolibrary.org/obo/OBI_0001621	longitude coordinate measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	longitude	A measurement datum that is the measure of the longitude coordinate of a site.
http://purl.obolibrary.org/obo/IAO_8000019	ontology module subsetted by OWL profile	http://purl.obolibrary.org/obo/IAO_8000017	ontology module subsetted by expressivity		
http://purl.obolibrary.org/obo/OBI_0001877	random access memory	http://purl.obolibrary.org/obo/IAO_0000178	material information bearer	RAM	Random-access memory (RAM) is a form of computer data storage. A random-access device allows stored data to be accessed directly in any random order. In contrast, other data storage media such as hard disks, CDs, DVDs and magnetic tape, as well as early primary memory types such as drum memory, read and write data only in a predetermined order, consecutively, because of mechanical design limitations. Therefore, the time to access a given data location varies significantly depending on its physical location
http://purl.obolibrary.org/obo/IAO_8000020	EL++ ontology module	http://purl.obolibrary.org/obo/IAO_8000019	ontology module subsetted by OWL profile		
http://purl.obolibrary.org/obo/OBI_0001908	testable hypothesis	http://purl.obolibrary.org/obo/IAO_0000030	information content entity	hypothesis	An information content entity that expresses an assertion that is intended to be tested.
http://purl.obolibrary.org/obo/BFO_0000001	entity				
http://purl.obolibrary.org/obo/OBI_0001913	computation run time	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum	computation run time datum	computation run time is a time measurement datum which corresponds the time expressed in second, minute, hour necessary for a computer program to complete a process execution, for example genome assembly. It is an important metrics as it indicates the resource occupancy and computer program efficiency.
http://purl.obolibrary.org/obo/RO_0000079	function of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of	is function of	a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0001940	N50	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item	weighted median item size	the weighted median item size or N50 is a weighted median of the lengths of items, equal to the length of the longest item i such that the sum of the lengths of items greater than or equal in length to i is greater than or equal to half the length of all of the items. With regard to assemblies the items are typically contigs or scaffolds. It therefore denotes the ability of the software to create contigs and provides information about the resulting sequence assembly
http://purl.obolibrary.org/obo/RO_0000080	quality of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of	quality_of	a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0002503	feces specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism	stool specimen	A specimen that is derived from feces.
http://purl.obolibrary.org/obo/RO_0000085	has function	http://purl.obolibrary.org/obo/RO_0000053	has characteristic	has_function	a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0002526	skin of body specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism	skin specimen	A specimen that is derived from skin.
http://purl.obolibrary.org/obo/RO_0000086	has quality	http://purl.obolibrary.org/obo/RO_0000053	has characteristic	has_quality	a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0100060	cultured cell population	http://purl.obolibrary.org/obo/OBI_0000047	processed material	cell culture sample	A processed material comprised of a collection of cultured cells that has been continuously maintained together in culture and shares a common propagation history.
http://purl.obolibrary.org/obo/RO_0002350	member of	http://purl.obolibrary.org/obo/BFO_0000050	part of	member part of	is member of is a mereological relation between a item and a collection.
http://purl.obolibrary.org/obo/OBI_0200000	data transformation	http://purl.obolibrary.org/obo/OBI_0000011	planned process	data operation	A planned process that produces output data from input data.
http://purl.obolibrary.org/obo/RO_0000087	has role	http://purl.obolibrary.org/obo/RO_0000053	has characteristic	has_role	a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0200022	variance stabilizing transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	variance stabilising transformation	A variance stabilizing transformation is a data transformation, described in PMID 12169536, whose input is a matrix [y_ik] and whose output is a matrix obtained by applying formula (6) in this paper. One of the goals is to obtain an output matrix whose rows have equal variances. The method relies on various assumptions described in the paper.
http://purl.obolibrary.org/obo/BFO_0000062	preceded by	http://purl.obolibrary.org/obo/RO_0002086	ends after	preceded_by	x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
http://purl.obolibrary.org/obo/OBI_0200029	mean centering	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	mean centring	A mean centering is a data transformation that takes as input an n-dimensional (real) vector, performs a mean calculation on its components, and subtracts the resulting mean from each component of the input.
http://purl.obolibrary.org/obo/RO_0000081	role of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of	role_of	a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0200030	median centering	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	median centring	A median centering is a data transformation that takes as input an n-dimensional (real) vector, performs a median calculation on its components, and subtracts the resulting median from each component of the input.
http://purl.obolibrary.org/obo/BFO_0000063	precedes	http://purl.obolibrary.org/obo/RO_0002222	temporally related to		x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
http://purl.obolibrary.org/obo/OBI_0200034	jackknifing method	http://purl.obolibrary.org/obo/OBI_0000792	statistical model validation	jackknifing	Jacknifing is a re-sampling data transformation process used to estimate the precision of sampling statistics and is a resampling method
http://purl.obolibrary.org/obo/IAO_0000219	denotes	http://purl.obolibrary.org/obo/IAO_0000136	is about		A primitive, instance-level, relation obtaining between an information content entity and some portion of reality. Denotation is what happens when someone creates an information content entity E in order to specifically refer to something. The only relation between E and the thing is that E can be used to 'pick out' the thing. This relation connects those two together. Freedictionary.com sense 3: To signify directly; refer to specifically
http://purl.obolibrary.org/obo/OBI_0200050	dimensionality reduction	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	data projection	A dimensionality reduction is data partitioning which transforms each input m-dimensional vector (x_1, x_2, ..., x_m) into an output n-dimensional vector (y_1, y_2, ..., y_n), where n is smaller than m.
http://purl.obolibrary.org/obo/IAO_0000221	is quality measurement of	http://purl.obolibrary.org/obo/IAO_0000136	is about		m is a quality measurement of q at t. When q is a quality, there is a measurement process p that has specified output m, a measurement datum, that is about q
http://purl.obolibrary.org/obo/OBI_0200051	principal components analysis dimensionality reduction	http://purl.obolibrary.org/obo/OBI_0200050	dimensionality reduction	pca data reduction	A principal components analysis dimensionality reduction is a dimensionality reduction achieved by applying principal components analysis and by keeping low-order principal components and excluding higher-order ones.
http://purl.obolibrary.org/obo/IAO_0000413	is duration of	http://purl.obolibrary.org/obo/IAO_0000136	is about		relates a process to a time-measurement-datum that represents the duration of the process
http://purl.obolibrary.org/obo/OBI_0200064	centroid mass spectrum analysis	http://purl.obolibrary.org/obo/OBI_0200085	mass spectrometry analysis	centroiding	A centroid mass spectrum is a data transformation in which many points are used to delineate a mass spectral peak, is converted into mass-centroided data by a data compression algorithm. The centroided mass peak is located at the weighted center of mass of the profile peak. The normalized area of the peak provides the mass intensity data.
http://purl.obolibrary.org/obo/OBI_0200073	family wise error rate correction method	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	FWER correction	A family wise error rate correction method is a multiple testing procedure that controls the probability of at least one false positive.
http://purl.obolibrary.org/obo/IAO_0000581	has time stamp	http://purl.obolibrary.org/obo/BFO_0000051	has part		relates a time stamped measurement datum to the time measurement datum that denotes the time when the measurement was taken
http://purl.obolibrary.org/obo/OBI_0200080	network analysis	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	network topology analysis	A data transformation that takes as input data that describes biological networks in terms of the node (a.k.a. vertex) and edge graph elements and their characteristics and generates as output properties of the constituent nodes and edges, the sub-graphs, and the entire network.
http://purl.obolibrary.org/obo/IAO_0000583	has measurement datum	http://purl.obolibrary.org/obo/BFO_0000051	has part		relates a time stamped measurement datum to the measurement datum that was measured
http://purl.obolibrary.org/obo/OBI_0200082	longitudinal data analysis	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	correlation analysis	Longitudinal analysis is a data transformation used to perform repeated observations of the same items over long periods of time.
http://purl.obolibrary.org/obo/OBI_0000293	has_specified_input	http://purl.obolibrary.org/obo/RO_0000057	has participant		The inverse property of is_specified_input_of
http://purl.obolibrary.org/obo/OBI_0200083	survival analysis objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	survival analysis	A data transformation objective which has the data transformation aims to model time to event data (where events are e.g. death and or disease recurrence); the purpose of survival analysis is to model the underlying distribution of event times and to assess the dependence of the event time on other explanatory variables
http://purl.obolibrary.org/obo/OBI_0000295	is_specified_input_of	http://purl.obolibrary.org/obo/RO_0000056	participates in		A relation between a planned process and a continuant participating in that process that is not created during  the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of.
http://purl.obolibrary.org/obo/OBI_0200089	multiple testing correction method	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	multiple testing procedure	A multiple testing correction method is a hypothesis test performed simultaneously on M > 1 hypotheses.  Multiple testing procedures produce a set of rejected hypotheses that is an estimate for the set of false null hypotheses while controlling for a suitably define Type I error rate
http://purl.obolibrary.org/obo/OBI_0000299	has_specified_output	http://purl.obolibrary.org/obo/RO_0000057	has participant		The inverse property of is_specified_output_of
http://purl.obolibrary.org/obo/OBI_0200091	inter-rater reliability objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	inter-rater agreement	a data transformation objective of determining the concordance or agreement between human judges.
http://purl.obolibrary.org/obo/OBI_0000312	is_specified_output_of	http://purl.obolibrary.org/obo/RO_0000056	participates in		A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.
http://purl.obolibrary.org/obo/OBI_0200092	Westfall and Young family wise error rate correction	http://purl.obolibrary.org/obo/OBI_0200073	family wise error rate correction method	Westfall and Young FWER correction	Is a data transformation process in which the Westfall and Young method is applied with the aim of controlling for multiple testing
http://purl.obolibrary.org/obo/OBI_0000643	has grain	http://purl.obolibrary.org/obo/BFO_0000051	has part		the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car.
http://purl.obolibrary.org/obo/OBI_0200098	soft independent modeling of class analogy analysis	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	SIMCA	Soft independent modeling by class analogy (SIMCA) is a descriptive statistics method for supervised classification of data. The method requires a training data set consisting of samples (or objects) with a set of attributes and their class membership. The term soft refers to the fact the classifier can identify samples as belonging to multiple classes and not necessarily producing a classification of samples into non-overlapping classes.
http://purl.obolibrary.org/obo/OBI_0000999	has category label	http://purl.obolibrary.org/obo/BFO_0000051	has part		A relation between a categorical measurement data item and the categorical label that indicates the value of that data item on the categorical scale.
http://purl.obolibrary.org/obo/OBI_0200100	canonical variate analysis	http://purl.obolibrary.org/obo/OBI_0200171	partitioning data transformation	CVA	canonical variate analysis is a form of discriminant analysis that takes several continuous predictor variables and uses the entire set to predict several criterion variables, each of which is also continuous. CVA simultaneously calculates a linear composite of all x variables and  a linear composite of all y variables. Unlike other multivariate techniques, these weighted composites are derived in pairs. Each linear combination is called a canonical variate and takes the general linear form.
http://purl.obolibrary.org/obo/OBI_0001937	has specified numeric value	http://purl.obolibrary.org/obo/OBI_0002135	has specified value		A relation between a value specification and a number that quantifies it.
http://purl.obolibrary.org/obo/OBI_0200105	partial least square regression analysis	http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method	PLS-RA	Partial least squares regression is an extension of the multiple linear regression model (see, e.g., Multiple Regression or General Stepwise Regression). In its simplest form, a linear model specifies the (linear) relationship between a dependent (response) variable Y, and a set of predictor variables, the X's, so that
Y = b0 + b1X1 + b2X2 + ... + bpXp
In this equation b0 is the regression coefficient for the intercept and the bi values are the regression coefficients (for variables 1 through p) computed from the data.
http://purl.obolibrary.org/obo/OBI_0001938	has value specification	http://purl.obolibrary.org/obo/BFO_0000051	has part		A relation between an information content entity and a value specification that specifies its value.
http://purl.obolibrary.org/obo/OBI_0200107	partial least square discriminant analysis	http://purl.obolibrary.org/obo/OBI_0200106	discriminant analysis	PLS-DA	PLS Discriminant Analysis (PLS-DA) is a discriminant analysis performed in order to sharpen the separation between groups of observations, by hopefully rotating PCA (Principal Components Analysis) components such that a maximum separation among classes is obtained, and to understand which variables carry the class separating information.
http://purl.obolibrary.org/obo/RO_0002223	starts	http://purl.obolibrary.org/obo/BFO_0000050	part of		inverse of starts with
http://purl.obolibrary.org/obo/OBI_0200111	data visualization	http://purl.obolibrary.org/obo/OBI_0000011	planned process	data encoding as image	A planned process with the objective to graphically represent some data by inputing the data and outputting images, diagrams or animations.
http://purl.obolibrary.org/obo/RO_0002351	has member	http://purl.obolibrary.org/obo/BFO_0000051	has part		has member is a mereological relation between a collection and an item.
http://purl.obolibrary.org/obo/OBI_0200125	data combination	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	data pooling	A data transformation in which individual input data elements and values are merged together into a output set of data elements and values.
http://purl.obolibrary.org/obo/OBI_0200141	log base	http://purl.obolibrary.org/obo/OBI_0200140	mathematical feature	logarithmic base	The log base is a feature of a logarithmic function which is defined in http://en.wikipedia.org/wiki/Logarithm. Its value can be any positive real number different from 1.
http://purl.obolibrary.org/obo/OBI_0200149	unit-variance scaling	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	autoscaling	A unit-variance scaling is a data transformation that divides all measurements of a variable by the standard deviation of that variable.
http://purl.obolibrary.org/obo/OBI_0200154	agglomerative hierarchical clustering	http://purl.obolibrary.org/obo/OBI_0200042	hierarchical clustering	bottom-up hierarchical clustering	An agglomerative hierarchical clustering is a hierarchical clustering which starts with separate clusters and then successively combines these clusters until there is only one cluster remaining.
http://purl.obolibrary.org/obo/OBI_0200155	divisive hierarchical clustering	http://purl.obolibrary.org/obo/OBI_0200042	hierarchical clustering	top-down hierarchical clustering	A divisive hierarchical clustering is a hierarchical clustering which starts with a single cluster and then successively splits resulting clusters until only clusters of individual objects remain.
http://purl.obolibrary.org/obo/OBI_0200160	generalized family wise error rate correction method	http://purl.obolibrary.org/obo/OBI_0200089	multiple testing correction method	gFWER correction	A generalized FWER correction method is a multiple testing procedure that controls the probability of at least k+1 false positives, where k is a user-supplied integer.
http://purl.obolibrary.org/obo/OBI_0200161	quantile number of false positives correction method	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	QNFP	A quantile number of false positives correction method is a MTP that controls for the pth quantile of the distribution of the number of false positives out of the total number of tests performed'
http://purl.obolibrary.org/obo/RO_0000091	has disposition	http://purl.obolibrary.org/obo/RO_0000053	has characteristic		a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/OBI_0200162	tail probability for the proportion of false positives correction method	http://purl.obolibrary.org/obo/OBI_0200089	multiple testing correction method	TPPFP correction method	A TPPFP correction method is a MTP that controls the probability that the proportion of false positives among all rejected hypotheses is no greater than a constant q, where q is between 0 and 1.
http://purl.obolibrary.org/obo/RO_0002087	immediately preceded by	http://purl.obolibrary.org/obo/BFO_0000062	preceded by	starts_at_end_of	
http://purl.obolibrary.org/obo/RO_0002091	starts during	http://purl.obolibrary.org/obo/RO_0002222	temporally related to	io	
http://purl.obolibrary.org/obo/OBI_0200163	false discovery rate correction method	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	FDR correction method	The false discovery rate is a  data transformation used in multiple hypothesis testing to correct for multiple comparisons. It controls the expected proportion of incorrectly rejected null hypotheses (type I errors) in a list of rejected hypotheses. It is a less conservative comparison procedure with greater power than familywise error rate (FWER) control, at a cost of increasing the likelihood of obtaining type I errors. .
http://purl.obolibrary.org/obo/OBI_0200164	proportion of expected false positives correction method	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	PEFP correction method	A proportion of expected false positives correction method is a multiple testing procedure that controls the ratio of the expected value of the numbers of false positives to the expected value of the numbers of rejected hypotheses.
http://purl.obolibrary.org/obo/OBI_0200165	quantile proportion of false positives correction method	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	QPFP correction method	A quantile proportion of false positives correction method is a multiple testing procedure that controls the pth quantile of the distribution of the proportion of false positives among the rejected hypothesis (false discovery rate).
http://purl.obolibrary.org/obo/OBI_0200175	class discovery data transformation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	unsupervised classification data transformation	A class discovery data transformation (sometimes called unsupervised classification) is a data transformation that has objective class discovery.
http://purl.obolibrary.org/obo/RO_0002092	happens during	http://purl.obolibrary.org/obo/RO_0002093	ends during	during	
http://purl.obolibrary.org/obo/RO_0002093	ends during	http://purl.obolibrary.org/obo/RO_0002222	temporally related to	overlaps	
http://purl.obolibrary.org/obo/RO_0000092	disposition of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of		
http://purl.obolibrary.org/obo/OBI_0200178	class discovery objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	clustering objective	A class discovery objective (sometimes called unsupervised classification) is a data transformation objective where the aim is to organize input data  (typically vectors of attributes) into classes, where the number of classes and their specifications are not known a priori. Depending on usage, the class assignment can be definite or probabilistic.
http://purl.obolibrary.org/obo/IAO_0000407	has coordinate unit label	http://purl.obolibrary.org/obo/BFO_0000051	has part		
http://purl.obolibrary.org/obo/IAO_0000039	has measurement unit label	http://purl.obolibrary.org/obo/BFO_0000051	has part		
http://purl.obolibrary.org/obo/RO_0002086	ends after	http://purl.obolibrary.org/obo/RO_0002222	temporally related to		
http://purl.obolibrary.org/obo/OBI_0200179	class prediction objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	classification objective	A class prediction objective (sometimes called supervised classification) is a data transformation objective where the aim is to create a predictor from training data through a machine learning technique. The training data consist of pairs of objects (typically vectors of attributes) and
class labels for these objects. The resulting predictor can be used to attach class labels to any valid novel input object. Depending on usage, the prediction can be definite or probabilistic. A classification is learned from the training data and can then be tested on test data.
http://purl.obolibrary.org/obo/RO_0000052	characteristic of			inheres_in	a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.
http://purl.obolibrary.org/obo/OBI_0200188	cross validation objective	http://purl.obolibrary.org/obo/OBI_0200172	partitioning objective	rotation estimation objective	A cross validation objective is a data transformation objective in which the aim is to partition a sample of data into subsets such that the analysis is initially performed on a single subset, while the other subset(s) are retained for subsequent use in confirming and validating the initial analysis.
http://purl.obolibrary.org/obo/RO_0000053	has characteristic			is bearer of	Inverse of characteristic_of
http://purl.obolibrary.org/obo/OBI_0200189	merging objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	combining objective	A merging objective is a data transformation objective in which the data transformation has the aim of performing a union of two or more sets.
http://purl.obolibrary.org/obo/OBI_0200195	proportional hazards model estimation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	Cox proportional hazards model	Proportional hazards model is a data transformation model to estimate the effects of different covariates influencing the times-to-failure of a system.
http://purl.obolibrary.org/obo/RO_0000056	participates in			participates_in	a relation between a continuant and a process, in which the continuant is somehow involved in the process
http://purl.obolibrary.org/obo/OBI_0500000	study design	http://purl.obolibrary.org/obo/IAO_0000104	plan specification	experimental design	A plan specification comprised of protocols (which may specify how and what kinds of data will be gathered) that are executed as part of an investigation and is realized during a study design execution.
http://purl.obolibrary.org/obo/RO_0000057	has participant			has_participant	a relation between a process and a continuant, in which the continuant is somehow involved in the process
http://purl.obolibrary.org/obo/OBI_0600015	group assignment	http://purl.obolibrary.org/obo/OBI_0000011	planned process	study assignment	group assignment is a process which has an organism as specified input and during which a role is assigned
http://purl.obolibrary.org/obo/RO_0001000	derives from			derives_from	a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity
http://purl.obolibrary.org/obo/OBI_0600043	genetic transformation	http://purl.obolibrary.org/obo/OBI_0000094	material processing	genetic modification	the introduction. alteration or integration of genetic material into a cell or organism
http://purl.obolibrary.org/obo/RO_0001001	derives into			derives_into	a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity
http://purl.obolibrary.org/obo/OBCS_0000003	F distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution	Fisher-Snedecor distribution	A continuous probability distribution that is associated with the f statistic.
http://purl.obolibrary.org/obo/RO_0001015	location of			location_of	a relation between two independent continuants, the location and the target, in which the target is entirely within the location
http://purl.obolibrary.org/obo/RO_0002000	2D boundary of			is boundary of	a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity
http://purl.obolibrary.org/obo/OBCS_0000005	normal distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution	Gaussian distribution	A continuous probability distribution that has a symmetrical curve, whose position and shape is determined by its location and scale parameters, the mean and standard deviation respectively.
http://purl.obolibrary.org/obo/RO_0002002	has 2D boundary			has_2D_boundary	a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity
http://purl.obolibrary.org/obo/OBCS_0000006	Student's t distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution	t-distribution	A continuous probability distribution that is is used to estimate population parameters when the sample size is small and/or when the population variance is unknown.
http://purl.obolibrary.org/obo/RO_0001025	located in			located_in	a relation between two independent continuants, the target and the location, in which the target is entirely within the location
http://purl.obolibrary.org/obo/OBCS_0000007	bivariate normal distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution	bivariate normality	A continuous probability distribution of two variables that has the traditional bell shape and the distribution of one variable is normal to each and every value of the other variable.
http://purl.obolibrary.org/obo/BFO_0000051	has part			has_part	a core relation that holds between a whole and its part
http://purl.obolibrary.org/obo/OBCS_0000008	log-normal distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution	log normal, lognormal	A continuous probability that is the distribution of a random variable X if ln(X) is normally distributed
http://purl.obolibrary.org/obo/BFO_0000050	part of			part_of	a core relation that holds between a part and its whole
http://purl.obolibrary.org/obo/OBCS_0000011	measurement scale	http://purl.obolibrary.org/obo/IAO_0000030	information content entity	scale of  measure	An information content entity that represents a type of scale on which a variable is measured, including nominal, ordinal, interval, ratio.
http://purl.obolibrary.org/obo/BFO_0000066	occurs in			unfolds_in	b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
http://purl.obolibrary.org/obo/OBI_0002135	has specified value				A relation between a value specification and a literal.
http://purl.obolibrary.org/obo/OBCS_0000017	cohen's kappa measurement	http://purl.obolibrary.org/obo/OBCS_0000109	kappa statistic	inter-rater agreement, inter-annotator agreement	A statistical measure of agreement for categorical data; a measure of inter-rater agreement or inter-annotator agreement.
http://purl.obolibrary.org/obo/BFO_0000067	contains process				[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
http://purl.obolibrary.org/obo/OBCS_0000022	multilevel model	http://purl.obolibrary.org/obo/OBCS_0000035	statistical model	hierarchical models	A statistical model of parameters that vary at more than one level; a type of regression model that explicitly takes into account structured/nested data
http://purl.obolibrary.org/obo/IAO_0000136	is about				A (currently) primitive relation that relates an information artifact to an entity.
http://purl.obolibrary.org/obo/OBCS_0000028	data collapsing	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	bracketing, grouping	A data transformation that combines categories or ranges of values to produce a smaller number of categories
http://purl.obolibrary.org/obo/IAO_0000417	is quality measured as				inverse of the relation of is quality measurement of
http://purl.obolibrary.org/obo/OBCS_0000031	Kolmogorov-Smirnov two sample test	http://purl.obolibrary.org/obo/OBCS_0000241	Kolmogorov–Smirnov test	two-sample KS test	A Kolmogorov-Smirnov test that compares two samples.
http://purl.obolibrary.org/obo/OBI_0000124	is_supported_by_data				The relation between a data item and a conclusion where the conclusion is the output of a data interpreting process and the data item is used as an input to that process
http://purl.obolibrary.org/obo/OBCS_0000035	statistical model	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	model	A directive information entity that represents a mathematical relationship which relates changes in a given response to changes in one or more factors. A statistical model is a formalization of relationships between variables in the form of mathematical equations.
http://purl.obolibrary.org/obo/OBI_0000292	has_feature_value				has_feature_value datatype property is used to describe the feature values which the feature class can contain, for example has_base can have feature values of nonNegativeInteger values.
http://purl.obolibrary.org/obo/OBCS_0000036	partitioning of variance components	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	variance components	Partitioning of the overall variation into assignable components
http://purl.obolibrary.org/obo/OBI_0000417	achieves_planned_objective				This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process.
http://purl.obolibrary.org/obo/OBCS_0000037	statistical effect	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	effect	A directive information entity that shows how changing the settings of a factor changes the response. The effect of a single factor is also called a main effect.
http://purl.obolibrary.org/obo/OBI_0000833	objective_achieved_by				This relation obtains between an objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process.
http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	variable	A directive information entity that specifies a data item that can be measured or counted and is used in a statistical analysis.
http://purl.obolibrary.org/obo/RO_0000058	is concretized as				A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.
http://purl.obolibrary.org/obo/OBCS_0000039	confounding variable specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	confounders	A variable specification that specifies a variable that may have a causal impact on both the independent variable and dependent variable; ignoring a confounding variable may bias empirical estimates of the causal effect of the independent variable.
http://purl.obolibrary.org/obo/RO_0000059	concretizes				A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.
http://purl.obolibrary.org/obo/OBCS_0000040	covariate specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	covariate	A variable specification that specifies a variable used in statistical analysis to correct, adjust, or modify the values of a dependent variable; an independent variable not manipulated by the investigator
http://purl.obolibrary.org/obo/OBCS_0000223	has probability distribution				A relation between a data set and a probability distribution.
http://purl.obolibrary.org/obo/OBCS_0000041	dichotomous variable specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	dichotomous variable	A variable that has only two categories.
http://purl.obolibrary.org/obo/OBCS_0000227	has probability density function				A relation between a probability distribution and probability.
http://purl.obolibrary.org/obo/OBCS_0000043	intervening variable specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	intervening variable, mediating variable	A variable postulated to be a predictor of one or more dependent variables, and simultaneously predicted by one or more independent variables
http://purl.obolibrary.org/obo/OBCS_0000237	test follows probability distribution				An object property that represents a relation between a statistical test and a probability distribution.
http://purl.obolibrary.org/obo/OBCS_0000050	censored data	http://purl.obolibrary.org/obo/IAO_0000027	data item	censoring	A data item collected from censoring that the value of a measurement or observation is only partially known.
http://purl.obolibrary.org/obo/IAO_0000235	denoted by				inverse of the relation 'denotes'
http://purl.obolibrary.org/obo/OBCS_0000052	Incidence rate	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	incidence	A data item that refers to the number of new events that have occurred in a specific time interval divided by the population at risk at the beginning of the time interval. The result gives the likelihood of developing an event in that time interval.
http://purl.obolibrary.org/obo/BFO_0000054	realized in			realized_in	
http://purl.obolibrary.org/obo/OBCS_0000055	prevalence rate	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	prevalence	A data item that refers to the number of individuals with a given disease at a given point in time divided by the population at risk at a specified point in time or over a specified period of time.
http://purl.obolibrary.org/obo/BFO_0000055	realizes				
http://purl.obolibrary.org/obo/IAO_0000004	has measurement value				
http://purl.obolibrary.org/obo/IAO_0000404	has x coordinate value				
http://purl.obolibrary.org/obo/OBCS_0000062	data sampling design	http://purl.obolibrary.org/obo/OBCS_0000137	data collection design	sampling plan	A plan specification that provides a detailed outline of which measurements will be taken at what times, on which material, in what manner, and by whom. Sampling plans should be designed in such a way that the resulting data will contain a representative sample of the parameters of interest and allow for all questions, as stated in the goals, to be answered. 
http://purl.obolibrary.org/obo/IAO_0000405	has z coordinate value				
http://purl.obolibrary.org/obo/OBCS_0000078	type 1 error rate	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	false positive rate	A quantitative confidence value that refers to the probability of incorrectly concluding that there is a statistically significant difference in a dataset. Alpha is the number after a p-value. Thus, a statistically significant difference reported as p<0.05 means that there is less than a 5 percent chance that the difference could have occurred by chance.
http://purl.obolibrary.org/obo/IAO_0000406	has y coordinate value				
http://purl.obolibrary.org/obo/OBCS_0000079	type 2 error rate	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	false negative rate	A quantitative confidence value that refers to the probability of incorrectly concluding that there was no statistically significant difference in a dataset. This error often reflects insufficient power of the study.
http://purl.obolibrary.org/obo/OBCS_0000081	coefficient of variation	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	variation coefficient	A quantitative confidence value that is the standard deviation of a data set divided by the mean of the same data set; a normalized measure of dispersion of a probability distribution
http://purl.obolibrary.org/obo/RO_0004096	DEPRECATED inheres in				
http://purl.obolibrary.org/obo/OBCS_0000082	statistical error	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	error	A quantitative confidence value that represents unexplained variation in a collection of observations; comopnents of error include random error and lack of fit error
http://purl.obolibrary.org/obo/RO_0004097	DEPRECATED bearer of				
http://purl.obolibrary.org/obo/OBCS_0000084	intraclass correlation coefficient	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	ICC	A quantitative confidence value that is a descriptive statistic and can be used to describe how strongly units in the same group resemble each other; unlike other correlation measures it operates on data structured as groups, rather than data structured as paired observations.
http://purl.obolibrary.org/obo/RO_0002222	temporally related to				
http://purl.obolibrary.org/obo/OBCS_0000086	logit regression	http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method	logistic regression	A type of regression analysis used for predicting the outcome of a categorical dependent variable
http://purl.obolibrary.org/obo/OBCS_0000088	non-randomization sampling design	http://purl.obolibrary.org/obo/OBCS_0000062	data sampling design	non-randomization sampling plan	A data sampling design that does not use randomization for sample selection
http://purl.obolibrary.org/obo/OBCS_0000089	randomization sampling design	http://purl.obolibrary.org/obo/OBCS_0000062	data sampling design	randomization sampling plan	A data sampling design that uses randomization for sample selection
http://purl.obolibrary.org/obo/OBCS_0000097	interaction effect	http://purl.obolibrary.org/obo/OBCS_0000037	statistical effect	moderation	A statistical effect that represents the role of a variable in an estimated model (most often a regression model) and its effect on the dependent variable. A variable that has an interaction effect will have a different effect on the dependent variable, depending on the level of some third variable.
http://purl.obolibrary.org/obo/OBCS_0000100	type I error	http://purl.obolibrary.org/obo/OBCS_0000082	statistical error	false positive	A statistical error that the null hypothesis is true but has been rejected; a test result that indicates a given condition has been fulfilled, when it actually has not been fulfilled
http://purl.obolibrary.org/obo/OBCS_0000101	type II error	http://purl.obolibrary.org/obo/OBCS_0000082	statistical error	false negative	A statistical error that the null hypothesis is false but has been accepted; a test result indicates that a condition failed, while it actually was successful.
http://purl.obolibrary.org/obo/OBCS_0000103	mann-whitney U test	http://purl.obolibrary.org/obo/OBCS_0000236	non-parametric test	Wilcoxon rank-sum test	A non-parametric test of the null hypothesis that two populations are the same against an alternative hypothesis
http://purl.obolibrary.org/obo/OBCS_0000111	mediating variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable	mediating variable, mediation	A statistical variable that specifies a variable describing how, rather than when, effects will occur by accounting for the relationship between the independent and dependent variables. A mediating relationship is one in which the path relating A to C is mediated by a third variable (B).
http://purl.obolibrary.org/obo/OBCS_0000112	moderator variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable	moderator, interaction	A statistical variable that specifies a variable affecting the direction and/or strength of the relation between dependent and independent variables; occurs when the relationship between two variables depends on a third variable
http://purl.obolibrary.org/obo/OBCS_0000116	probability density function	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	density function	A data transformation that represents a mathematical function describing the relative likelihood of a continuous random variable to take on a value.
http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	http://purl.obolibrary.org/obo/OBCS_0000001	statistical data analysis	significantly statistical data analysis	A statistical data analysis that uses patterns in the sample data to draw inferences about the population represented, accounting for randomness.
http://purl.obolibrary.org/obo/OBCS_0000122	transformed data matrix	http://purl.obolibrary.org/obo/IAO_0000027	data item	set of transformed data sets	A data item that consists of two or more data sets that are produced as the output of a data transformation.
http://purl.obolibrary.org/obo/OBCS_0000132	data collection by sampling	http://purl.obolibrary.org/obo/OBCS_0000002	data collection	data sampling	A data collection process that results in a collection of data from a sampling process.
http://purl.obolibrary.org/obo/OBCS_0000133	dependent variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable	dependent variable	A statistical variable that represents the output or effect, or is tested to see if it is the effect in an experiment or a modeling.
http://purl.obolibrary.org/obo/OBCS_0000136	numerical data item	http://purl.obolibrary.org/obo/IAO_0000027	data item	numeric data	A data item which consists of digits as opposed to letters of the alphabet of special characters
http://purl.obolibrary.org/obo/OBCS_0000140	robust multi-array average normalization	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	RMA normalization	A normalization data transformation that used to create normalized gene expression level from microarray raw data. The raw intensity values are background corrected, log2 transformed and then quantile normalized in the RMA normalization process. 
http://purl.obolibrary.org/obo/OBCS_0000141	significance analysis of microarrays	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	SAM	An inferential statistical data analysis that is established in 2001 by Virginia Tusher, Robert Tibshirani and Gilbert Chu, for determining whether changes in gene expression are statistically significant.
http://purl.obolibrary.org/obo/OBCS_0000142	signal-2-noise statistical analysis	http://purl.obolibrary.org/obo/OBCS_0000025	univariate analysis	signal-2-noise statistic	A univariate analysis that calculates  the level of a desired signal to the level of background noise to identify which detected signal is more signal than noise. It can be used to identify differentially expressed genes.
http://purl.obolibrary.org/obo/OBCS_0000145	contingency table	http://purl.obolibrary.org/obo/IAO_0000030	information content entity	error matrix	A data item with a specific table layout that allows visualization of the performance of an algorithm. Each column of the matrix represents the instances in a predicted class, while each row represents the instances in an actual class.
http://purl.obolibrary.org/obo/OBCS_0000147	Gene Set Enrichment Analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	GSEA	An inferential statistical data analysis that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes).
http://purl.obolibrary.org/obo/OBCS_0000150	standardized mortality ratio	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	SMR	A data item which is the ratio of observed deaths in the study group to expected deaths in the general population.
http://purl.obolibrary.org/obo/OBCS_0000162	representation validity	http://purl.obolibrary.org/obo/OBCS_0000158	content validity	translation validity	A content validity that refers to the extent to which an abstract theoretical construct can be turned into a specific practical test.
http://purl.obolibrary.org/obo/OBCS_0000163	face validity	http://purl.obolibrary.org/obo/OBCS_0000158	content validity	translation validity	A content validity that estimates whether a test appears to measure a certain criterion. It is not guaranteed that the test actually measures phenomena in that domain. When the test does not appear to be measuring what it is, it has low face validity.
http://purl.obolibrary.org/obo/OBCS_0000168	differential expression analysis using LIMMA linear models for microarry data	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	LIMMA data analysis	A differential expression analysis using LIMMA linear model to identify differential expression for microarray data.
http://purl.obolibrary.org/obo/OBCS_0000169	summing data values	http://purl.obolibrary.org/obo/OBI_0200000	data transformation	summing data transformation	A data transformation that add two or more numbers, magnitudes, quantities, or particulars as determined by or as if by the mathematical process of addition.
http://purl.obolibrary.org/obo/OBCS_0000173	data collection by web crawling	http://purl.obolibrary.org/obo/OBCS_0000171	data collection from online resource	data collection using Web spider	An online data collection process that extracts data from online using a web crawler. A Web crawler is an Internet bot which systematically browses the World Wide Web and gets data from WWW.
http://purl.obolibrary.org/obo/OBCS_0000175	web crawling software	http://purl.obolibrary.org/obo/IAO_0000010	software	web spider	A software that is used to browses the World Wide Web in a methodical, automated manner.
http://purl.obolibrary.org/obo/OBCS_0000182	Kriging	http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method	Gaussian process regression	A regression method of interpolation for which the interpolated values are modeled by a Gaussian process governed by prior covariances, as opposed to a piecewise-polynomial spline chosen to optimize smoothness of the fitted values.
http://purl.obolibrary.org/obo/OBCS_0000193	numerical data value	http://purl.obolibrary.org/obo/IAO_0000030	information content entity	mathematical value	An information content entity that refers to a number value of a data item.
http://purl.obolibrary.org/obo/OBCS_0000198	undirected graph	http://purl.obolibrary.org/obo/OBCS_0000216	mathematic graph	undirected network	A mathematic graph that a set of objects (vertices or nodes) that are connected together, where all the edges between two objects are bidirectional.
http://purl.obolibrary.org/obo/OBCS_0000201	discrete variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable	categorical variable	A statistical variable over a particular range of real values is one for which, for any value in the range that the variable is permitted to take on, there is a positive minimum distance to the nearest other permissible value.
http://purl.obolibrary.org/obo/OBCS_0000211	Box-Cox distribution	http://purl.obolibrary.org/obo/OBCS_0000005	normal distribution	power-normal distribution	A normal distribution that is the distribution of a random variable X for which the Box–Cox transformation on X follows a truncated normal distribution.
http://purl.obolibrary.org/obo/OBCS_0000215	bipartite graph	http://purl.obolibrary.org/obo/OBCS_0000216	mathematic graph	bigraph	A mathematic graph that contains a set of objects (vertices or nodes) decomposed into two disjoint sets such that no two objects within the same set are adjacent.
http://purl.obolibrary.org/obo/OBCS_0000218	derived data from statistical analysis	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item	statistic	A data item that is derived from a statistical data analysis.
http://purl.obolibrary.org/obo/OBCS_0000219	derived data from descriptive statistical analysis	http://purl.obolibrary.org/obo/OBCS_0000218	derived data from statistical analysis	descriptive statistic	A data item that is derived from a descriptive statistical data analysis.
http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	http://purl.obolibrary.org/obo/OBCS_0000218	derived data from statistical analysis	inferential statistic	A data item that is derived from an inferential statistical data analysis.
http://purl.obolibrary.org/obo/OBCS_0000225	data set following normal distribution	http://purl.obolibrary.org/obo/OBCS_0000224	data set following probability distribution	normally distributed data set	A data set that follows a normal distribution
http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	http://purl.obolibrary.org/obo/OBI_0000011	planned process	dataset creation	A planned process that has a data set as its specified output.
http://purl.obolibrary.org/obo/OBCS_0000164	Extraction of Differential Gene Expression software	http://purl.obolibrary.org/obo/IAO_0000010	software	EDGE	A software that is used for the differential gene expression significance analysis of DNA microarray experiments for both standard and time course experiments. The outputs consist of bothe p-values and q-values.
http://purl.obolibrary.org/obo/OBCS_0000165	Patterns from Gene Expression software	http://purl.obolibrary.org/obo/IAO_0000010	software	PaGE	A software that can be used to produce lists of differentially expressed genes with confidence measures attached. These lists are generated via a False Discovery Rate (FDR) method of controlling the false positives. Patterns from Gene Expression (PaGE) is more than a differential expression analysis tool.  PaGE is a tool to attach descriptive, dependable, and easily interpretable expression patterns to genes across multiple conditions, each represented by a set of replicated array experiments. 

http://purl.obolibrary.org/obo/OBCS_0000166	GLobal Identifier of Target Regions software	http://purl.obolibrary.org/obo/IAO_0000010	software	GLITR	A software that is used to identify  transcription factor binding sites in a genome that have been enriched with aligned reads generated from ChIP-Seq technology.
http://purl.obolibrary.org/obo/OBI_0003591	chronic allograft damage index score	http://purl.obolibrary.org/obo/OGMS_0000123	clinical data item	CADI	A clinical data item that quantifies the degree of tissue damage in biopsies taken from transplanted kidneys.
http://purl.obolibrary.org/obo/OBI_0003592	sequential organ failure assessment score	http://purl.obolibrary.org/obo/OGMS_0000123	clinical data item	SOFA score	A clinical data item that quantifies the degree of function of a critically ill patient's organs.
http://purl.obolibrary.org/obo/OBI_0003593	physician's global assessment of disease activity	http://purl.obolibrary.org/obo/OGMS_0000123	clinical data item	MD global, PGA	A clinical data item that quantifies a physician's judgement of the overall activity of some specific disease in a patient.
http://purl.obolibrary.org/obo/OBI_0003594	human leukocyte antigen mismatch count	http://purl.obolibrary.org/obo/OBI_0001404	genetic characteristics information	HLA mismatch count, HLA mismatch	A genetic characteristics information that is about the number of dissimilarities in the human leukocyte antigen gene complexes of two humans.
http://purl.obolibrary.org/obo/OBI_0003039	feces microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay	stool test for microorganisms	An organism detection assay that detects microorganisms in a feces specimen.
http://purl.obolibrary.org/obo/OBI_0003077	entomological data item	http://purl.obolibrary.org/obo/IAO_0000027	data item	entomological measurement datum	A data item that is about a collection of insects.
http://purl.obolibrary.org/obo/IAO_8000002	editors ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module	source ontology module	An ontology module that is intended to be directly edited, typically managed in source control, and typically not intended for direct consumption by end-users.
http://purl.obolibrary.org/obo/IAO_8000005	import ontology module	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module	import file	A subset ontology module that is intended to be imported from another ontology.
http://purl.obolibrary.org/obo/IAO_8000009	single layer subset ontology module	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module	ribbon subset	A subset ontology that is largely comprised of a single layer or strata in an ontology class hierarchy. The purpose is typically for rolling up for visualization. The classes in the layer need not be disjoint.
http://purl.obolibrary.org/obo/IAO_8000010	exclusion subset ontology module	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module	antislim	A subset of an ontology that is intended to be excluded for some purpose. For example, a blacklist of classes.
http://purl.obolibrary.org/obo/IAO_8000011	external import ontology module	http://purl.obolibrary.org/obo/IAO_8000005	import ontology module	external import	An imported ontology module that is derived from an external ontology. Derivation methods include the OWLAPI SLME approach.
http://purl.obolibrary.org/obo/IAO_8000012	species subset ontology module	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module	taxon subset	A subset ontology that is crafted to either include or exclude a taxonomic grouping of species.
http://purl.obolibrary.org/obo/OBI_0003374	remote patient assessment	http://purl.obolibrary.org/obo/OBI_0003366	organism diagnostic process	telehealth patient assessment	An organism diagnostic process which involves a remote assessment of a patient by a clinician.
http://purl.obolibrary.org/obo/OBCS_0000058	sensitivity	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	sensitivity estimate	A data item that measures the proportion of actual positives which are correctly identified as such (e.g. the percentage of sick people who are correctly identified as having the condition).
http://purl.obolibrary.org/obo/OBCS_0000059	specificity	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis	true negative rate	A data item that refers to the proportion of negatives in a binary classification test which are correctly identified
http://purl.obolibrary.org/obo/OBCS_0000249	independent component analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	ICA	An inferential statistical data analysis which is used to find the independent components (also called factors, latent variables or sources) by maximizing the statistical independence of the estimated components.
http://purl.obolibrary.org/obo/OBI_0003141	categorical binding datum	http://purl.obolibrary.org/obo/OBI_0001181	binding datum	qualitative binding datum	A binding datum that is expressed as a categorical value.
http://purl.obolibrary.org/obo/OBI_0002371	diagnosis of cancer	http://purl.obolibrary.org/obo/OGMS_0000073	diagnosis	cancer diagnosis	A diagnosis that is an assertion that a patient who is the subject of a diagnostic process has cancer.
http://purl.obolibrary.org/obo/OBI_0002975	input protein sequence start site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	query protein start site	The position of the first amino acid in a protein sequence being analyzed (input protein sequence).
http://purl.obolibrary.org/obo/OBI_0002976	input protein sequence stop site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	query protein stop site	The position of the last amino acid in a protein sequence being analyzed (input protein sequence).
http://purl.obolibrary.org/obo/OBI_0002977	input gene sequence start site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	query gene start site	The position of the first nucleotide in a gene sequence being analyzed (input gene sequence).
http://purl.obolibrary.org/obo/OBI_0002978	input gene sequence stop site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	query gene stop site	The position of the last nucelotide in a gene sequence being analyzed (input gene sequence).
http://purl.obolibrary.org/obo/OBI_0002979	reference protein sequence start site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	subject protein start site	The position of the first amino acid in a reference protein sequence (sequence being used for comparison).
http://purl.obolibrary.org/obo/OBI_0002980	reference protein sequence stop site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	subject protein stop site	The position of the last amino acid in a reference protein sequence (sequence being used for comparison).
http://purl.obolibrary.org/obo/OBI_0002981	reference gene sequence start site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	subject gene start site	The position of the first nucleotide in a reference gene sequence (sequence being used for comparison).
http://purl.obolibrary.org/obo/OBI_0002982	reference gene sequence stop site	http://purl.obolibrary.org/obo/OBI_0000973	sequence data	subject gene stop site	The position of the last nucelotide in a reference sequence (sequence being used for comparison).
http://purl.obolibrary.org/obo/OBI_0002985	magnetic resonance imaging assay	http://purl.obolibrary.org/obo/OBI_0000185	imaging assay	MRI	An imaging assay in which nuclear magnetic resonance is used to produce information about the interior structure and composition of an input material entity.
http://purl.obolibrary.org/obo/OBCS_0000120	data matrix	http://purl.obolibrary.org/obo/IAO_0000027	data item	set of data sets	A data item that is more specifically a rectangular array of numbers, symbols, or expressions, arranged in rows and columns.
http://purl.obolibrary.org/obo/OBCS_0000264	Monte Carlo analysis	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	蒙特卡罗分析	A broad class of computational algorithms that rely on repeated random sampling to obtain numerical results.The goal of Monte Carlo analysis is to trace out the structure of the distributions of model output that results from specified uncertainty distributions of model inputs and model parameters.  
http://purl.obolibrary.org/obo/OBCS_0000267	scenario analysis	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	情境分析	A method that tries to describe logical and internally consistent sequences  of events to explore how the future might, could or should evolve from the past and present.
http://purl.obolibrary.org/obo/OBCS_0000266	Numeral Unit Spread Assessment Pedigree	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	数字单元传播评估谱系	The NUSAP (Numeral Unit Spread Assessment, Pedigree) method aims to provide an analysis and diagnosis of uncertainty. It captures both quantitative dimensions and qualitative dimensions of uncertainty (Funtowicz and Ravetz 1990).
http://purl.obolibrary.org/obo/OBCS_0000265	expert elicitation	http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	专家启发法	A structured process to elicit subjective judgements from experts. Expert elicitation in the context of uncertainty quantification aims at a credible and traceable  account of specifying probabilistic information regarding uncertainty, in a structured and documented way.
http://purl.obolibrary.org/obo/OBI_0002988	specimen collection duration	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum	specimen collection duration	A time measurement datum that is the count of collection cycles over which a specimen collection process occurs.
http://purl.obolibrary.org/obo/OBCS_0000240	intent-to-treat analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis	ITT analysis	An inferential statistical data analysis that  includes all randomized patients in the groups to which they were randomly assigned. The intent-to-treat analysis  is based on the initial treatment assignment and not on the treatment eventually received.  ITT analysis includes every subject who is randomized according to randomized treatment assignment. It ignores noncompliance, protocol deviations, withdrawal, and anything that happens after randomization.
http://purl.obolibrary.org/obo/OBCS_0000241	Kolmogorov–Smirnov test	http://purl.obolibrary.org/obo/OBCS_0000236	non-parametric test	KS test	A non-parametric test of the equality of continuous, one-dimensional probability distributions that can be used to compare a sample with a reference probability distribution (one-sample K–S test), or to compare two samples (two-sample K–S test). The distributions considered under the null hypothesis are continuous distributions but are otherwise unrestricted.
http://purl.obolibrary.org/obo/OBCS_0000242	Kolmogorov-Smirnov one sample test	http://purl.obolibrary.org/obo/OBCS_0000241	Kolmogorov–Smirnov test	one-sample KS test	A Kolmogorov-Smirnov test that compares a sample with a reference probability distribution.
http://purl.obolibrary.org/obo/OBCS_0000243	log-rank test	http://purl.obolibrary.org/obo/OBCS_0000236	non-parametric test	log-rank analysis	A non-parametric test that compares the survival distributions of two samples, and iis appropriate to use when the data are right skewed and censored (technically, the censoring must be non-informative). It is widely used in clinical trials to establish the efficacy of a new treatment in comparison with a control treatment when the measurement is the time to event (such as the time from initial treatment to a heart attack).
http://purl.obolibrary.org/obo/OBCS_0000244	Pearson's chi-square test	http://purl.obolibrary.org/obo/OBI_0200200	chi square test	Pearson's X^2 test	A chi square test that is applied to sets of categorical data to evaluate how likely it is that any observed difference between the sets arose by chance. It is suitable for unpaired data from large samples. It is also the most widely used of many chi-squared tests.
http://purl.obolibrary.org/obo/OBCS_0000245	Yates' chi-squared test	http://purl.obolibrary.org/obo/OBI_0200200	chi square test	Yates' correction for continuity	A chi square test that is used in certain situations when testing for independence in a contingency table. In some cases, Yates' correction may adjust too far, and so its current use is limited.
http://purl.obolibrary.org/obo/OBCS_0000246	Cochran–Mantel–Haenszel test	http://purl.obolibrary.org/obo/OBI_0200200	chi square test	CMH test	A chi square test that is used in the analysis of stratified or matched categorical data. It allows an investigator to test the association between a binary predictor or treatment and a binary outcome such as case or control status while taking into account the stratification. Unlike the McNemar test which can only handle pairs, the CMH test handles arbitrary strata size. It is named after William G. Cochran, Nathan Mantel and William Haenszel.
http://purl.obolibrary.org/obo/OBCS_0000247	McNemar's test	http://purl.obolibrary.org/obo/OBI_0200200	chi square test	CMH test	A chi square test that is used on paired nominal data. It is applied to 2 × 2 contingency tables with a dichotomous trait, with matched pairs of subjects, to determine whether the row and column marginal frequencies are equal (that is, whether there is "marginal homogeneity"). It is named after Quinn McNemar, who introduced it in 1947.
http://purl.obolibrary.org/obo/OBCS_0000248	Receiver operating characteristic curve analysis	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating	ROC curve analysis	A data transformation that is used to calculate a ROC curve.
http://purl.obolibrary.org/obo/OBI_0002780	nasal aspirate specimen	http://purl.obolibrary.org/obo/OBI_0100051	specimen	nasal wash specimen|nasopharyngeal aspirate	A specimen that is collected with a suctioning tube from the nasal cavity.
http://purl.obolibrary.org/obo/OBI_0002785	aspiration specimen collection	http://purl.obolibrary.org/obo/OBI_0000659	specimen collection process	aspiration procedure	Procedure using suction, usually with a thin needle and syringe, to remove bodily fluid or tissue.
http://purl.obolibrary.org/obo/OBI_0002993	prevalence of blood meal specimens from a host organism	http://purl.obolibrary.org/obo/IAO_0000027	data item	host blood index	A data item that is the frequency of blood whose source is from a specified host organism in collected blood meal specimens.
http://purl.obolibrary.org/obo/OBI_0002994	presence of blood from host organism in blood meal specimen	http://purl.obolibrary.org/obo/IAO_0000027	data item	presence of blood meal host organism	A data item that indicates whether blood in a blood meal specimen came from a specified host organism.
http://purl.obolibrary.org/obo/OBI_0002471	date process started	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the date when a process was initiated.
http://purl.obolibrary.org/obo/OBI_0002476	number of rounds of amplification	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the number of times an amplification reaction happened.
http://purl.obolibrary.org/obo/OBI_0002483	spike-in dilution factor	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that indicates the dilution of spike-in added to a specimen.
http://purl.obolibrary.org/obo/OBI_0003232	cerebrospinal fluid assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has a cerebrospinal fluid specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003233	endotracheal aspirate assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has an endotracheal aspirate specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003234	induced sputum assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has an induced sputum specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003235	lung assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has a lung specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003236	milk assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has a milk specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003237	feces assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has a feces specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003238	umbilical cord blood assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has an umbilical cord blood specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003240	cerebrospinal fluid microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a cerebrospinal fluid specimen.
http://purl.obolibrary.org/obo/OBI_0003241	endotracheal tube aspirate microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in an endotracheal aspirate specimen.
http://purl.obolibrary.org/obo/OBI_0003242	induced sputum microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in an induced sputum specimen.
http://purl.obolibrary.org/obo/OBI_0003243	blood assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of a blood assay.
http://purl.obolibrary.org/obo/OBI_0003244	blood microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a blood microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003245	feces assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of a feces assay.
http://purl.obolibrary.org/obo/OBI_0003246	feces microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a feces microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003247	urine assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of a urine assay.
http://purl.obolibrary.org/obo/OBI_0003248	urine microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a urine microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003249	induced sputum assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of a induced sputum assay.
http://purl.obolibrary.org/obo/OBI_0003251	induced sputum microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of an induced sputum microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003252	cerebrospinal fluid assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of a cerebrospinal fluid assay.
http://purl.obolibrary.org/obo/OBI_0003253	cerebrospinal fluid microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a cerebrospinal fluid microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003254	endotracheal aspirate assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		An organism detection datum that is the specified output of an endotracheal aspirate assay.
http://purl.obolibrary.org/obo/OBI_0003255	endotracheal tube aspirate microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of an endotracheal tube aspirate microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003256	lung microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a lung microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003257	nasopharyngeal or oropharyngeal swab microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a nasopharyngeal or oropharyngeal swab microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003258	pleural fluid microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a pleural fluid microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003259	umbilical cord blood assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of an umbilical cord blood assay.
http://purl.obolibrary.org/obo/OBI_0003260	umbilical cord blood microbiology datum	http://purl.obolibrary.org/obo/OBI_0003259	umbilical cord blood assay datum		An organism detection datum that is the specified output of an umbilical cord blood microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003261	bacteria in blood datum	http://purl.obolibrary.org/obo/OBI_0003244	blood microbiology datum		A blood microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003262	virus in blood datum	http://purl.obolibrary.org/obo/OBI_0003244	blood microbiology datum		A blood microbiology datum that is about a virus.
http://purl.obolibrary.org/obo/OBI_0003263	eukaryota in blood datum	http://purl.obolibrary.org/obo/OBI_0003244	blood microbiology datum		A blood microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003264	bacteria in feces datum	http://purl.obolibrary.org/obo/OBI_0003246	feces microbiology datum		A feces microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003265	eukaryota in feces datum	http://purl.obolibrary.org/obo/OBI_0003246	feces microbiology datum		A feces microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003266	virus in feces datum	http://purl.obolibrary.org/obo/OBI_0003246	feces microbiology datum		A feces microbiology datum that is about a virus.
http://purl.obolibrary.org/obo/OBI_0003267	eukaryota in urine datum	http://purl.obolibrary.org/obo/OBI_0003248	urine microbiology datum		A urine microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003268	bacteria in induced sputum datum	http://purl.obolibrary.org/obo/OBI_0003251	induced sputum microbiology datum		An induced sputum microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003269	eukaryota in induced sputum datum	http://purl.obolibrary.org/obo/OBI_0003251	induced sputum microbiology datum		An induced sputum microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003270	virus in induced sputum datum	http://purl.obolibrary.org/obo/OBI_0003251	induced sputum microbiology datum		An induced sputum microbiology datum that is about a virus.
http://purl.obolibrary.org/obo/OBI_0003271	bacteria in endotracheal tube aspirate datum	http://purl.obolibrary.org/obo/OBI_0003255	endotracheal tube aspirate microbiology datum		An endotracheal tube aspirate microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003272	bacteria in lung datum	http://purl.obolibrary.org/obo/OBI_0003256	lung microbiology datum		A lung microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003273	eukaryota in lung datum	http://purl.obolibrary.org/obo/OBI_0003256	lung microbiology datum		A lung microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003274	virus in lung datum	http://purl.obolibrary.org/obo/OBI_0003256	lung microbiology datum		A lung microbiology datum that is about a virus.
http://purl.obolibrary.org/obo/OBI_0003275	bacteria in nasopharyngeal or oropharyngeal swab datum	http://purl.obolibrary.org/obo/OBI_0003257	nasopharyngeal or oropharyngeal swab microbiology datum		A nasopharyngeal or oropharyngeal swab microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003283	pleural fluid microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a pleural fluid specimen.
http://purl.obolibrary.org/obo/OBI_0003284	umbilical cord blood microbiology assay	http://purl.obolibrary.org/obo/OBI_0002649	blood microbiology assay		An organism detection assay that detects microorganisms in an umbilical cord blood specimen.
http://purl.obolibrary.org/obo/OBI_0003285	nasopharyngeal or oropharyngeal swab microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a nasopharyngeal or oropharyngeal swab specimen.
http://purl.obolibrary.org/obo/CHEBI_23367	molecular entity	http://purl.obolibrary.org/obo/BFO_0000040	material entity		Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity.
http://purl.obolibrary.org/obo/OBI_0002566	file merge	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation in which data contained in 2 or more files are merged into a single file.
http://purl.obolibrary.org/obo/OBI_0002567	sequence alignment	http://purl.obolibrary.org/obo/OBI_0200187	sequence analysis data transformation		A data transformation in which one or more sequences (reads) are positioned on a reference sequence template (often a reference set of genes), according to the genetic base-pairing paradigm.
http://purl.obolibrary.org/obo/OBI_0002568	sequence data feature count tabulation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		The counting of features (typically, genes) within aligned sequence data, and organization of these counts into one or more tables.
http://purl.obolibrary.org/obo/OBI_0002569	trimmed sequence data	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item		The results of a data transformation of sequence data in which (e.g., low quality) read bases are removed, to achieve some specific objective.
http://purl.obolibrary.org/obo/OBI_0002578	adapter sequence data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		Nucleotide sequences of molecules that are ligated to assay samples prior to sequencing of these samples;  these sequences are provided by assay kit manufacturers and typically used to combine sequencing of multiple samples in one assay run.
http://purl.obolibrary.org/obo/OBI_0002579	adapter-trimmed sequence data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		The results of a data transformation of sequence data in which reference subsequences corresponding to ligated library adapters are removed.
http://purl.obolibrary.org/obo/OBI_0002580	aligned sequence data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		The results of a sequence alignment.
http://purl.obolibrary.org/obo/OBI_0002581	merged aligned sequence data	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item		The results of a data transformation of sequence data in which files containing aligned sequence data are merged together
http://purl.obolibrary.org/obo/OBI_0002582	sequence library feature count data	http://purl.obolibrary.org/obo/IAO_0000100	data set		The results of a sequence data feature count tabulation.
http://purl.obolibrary.org/obo/OBI_0002583	DNA methylation profiling data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		The results of a DNA methylation profiling assay
http://purl.obolibrary.org/obo/OBI_0002584	differential expression analysis data	http://purl.obolibrary.org/obo/IAO_0000100	data set		The results of a differential expression analysis.
http://purl.obolibrary.org/obo/OBI_0002585	sequence trimming	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation in which subsequences of a molecular sequence are cut (removed).
http://purl.obolibrary.org/obo/OBI_0003365	milk assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of a milk assay.
http://purl.obolibrary.org/obo/PR_000050567	protein-containing material entity	http://purl.obolibrary.org/obo/BFO_0000040	material entity		A material entity that minimally consists of a protein.
http://purl.obolibrary.org/obo/PATO_0000001	quality	http://purl.obolibrary.org/obo/BFO_0000020	specifically dependent continuant		A dependent entity that inheres in a bearer by virtue of how the bearer is related to other entities
http://purl.obolibrary.org/obo/PATO_0000161	rate	http://purl.obolibrary.org/obo/PATO_0000001	quality		A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time.
http://purl.obolibrary.org/obo/PATO_0000169	viability	http://purl.obolibrary.org/obo/PATO_0001995	organismal quality		An organismal quality inhering in a bearer or a population by virtue of the bearer's disposition to survive and develop normally or the number of surviving individuals in a given population.
http://purl.obolibrary.org/obo/PATO_0001018	physical quality	http://purl.obolibrary.org/obo/PATO_0001241	physical object quality		A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.
http://purl.obolibrary.org/obo/PATO_0001241	physical object quality	http://purl.obolibrary.org/obo/PATO_0000001	quality		A quality which inheres in a continuant.
http://purl.obolibrary.org/obo/UBERON_8470000	placental blood	http://purl.obolibrary.org/obo/UBERON_0000178	blood		Blood located in the placenta.
http://purl.obolibrary.org/obo/OBCS_0000322	technological surprise	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition		New developments or breakthroughs in technology or unexpected consequences (‘side-effects’) of technologies.
http://purl.obolibrary.org/obo/UBERON_0001728	nasopharynx	http://purl.obolibrary.org/obo/UBERON_0000072	proximo-distal subdivision of respiratory tract		The section of the pharynx that lies above the soft palate.
http://purl.obolibrary.org/obo/UBERON_0001729	oropharynx	http://purl.obolibrary.org/obo/UBERON_0013522	subdivision of tube		The portion of the pharynx that lies between the soft palate and the upper edge of the epiglottis.
http://purl.obolibrary.org/obo/UBERON_0002371	bone marrow	http://purl.obolibrary.org/obo/UBERON_0000479	tissue		The soft tissue that fills the cavities of bones.
http://purl.obolibrary.org/obo/BFO_0000002	continuant	http://purl.obolibrary.org/obo/BFO_0000001	entity		An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts.
http://purl.obolibrary.org/obo/BFO_0000003	occurrent	http://purl.obolibrary.org/obo/BFO_0000001	entity		An entity that has temporal parts and that happens, unfolds or develops through time.
http://purl.obolibrary.org/obo/BFO_0000004	independent continuant	http://purl.obolibrary.org/obo/BFO_0000002	continuant		b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])
http://purl.obolibrary.org/obo/BFO_0000015	process	http://purl.obolibrary.org/obo/BFO_0000003	occurrent		p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])
http://purl.obolibrary.org/obo/BFO_0000017	realizable entity	http://purl.obolibrary.org/obo/BFO_0000020	specifically dependent continuant		A specifically dependent continuant  that inheres in continuant  entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances.
http://purl.obolibrary.org/obo/BFO_0000020	specifically dependent continuant	http://purl.obolibrary.org/obo/BFO_0000002	continuant		b is a specifically dependent continuant = Def. b is a continuant & there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])
http://purl.obolibrary.org/obo/BFO_0000023	role	http://purl.obolibrary.org/obo/BFO_0000017	realizable entity		A realizable entity  the manifestation of which brings about some result or end that is not essential to a continuant  in virtue of the kind of thing that it is but that can be served or participated in by that kind of continuant  in some kinds of natural, social or institutional contexts.
http://purl.obolibrary.org/obo/BFO_0000031	generically dependent continuant	http://purl.obolibrary.org/obo/BFO_0000002	continuant		b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])
http://purl.obolibrary.org/obo/BFO_0000035	process boundary	http://purl.obolibrary.org/obo/BFO_0000003	occurrent		p is a process boundary =Def. p is a temporal part of a process & p has no proper temporal parts. (axiom label in BFO2 Reference: [084-001])
http://purl.obolibrary.org/obo/BFO_0000040	material entity	http://purl.obolibrary.org/obo/BFO_0000004	independent continuant		An independent continuant that is spatially extended whose identity is independent of that of other entities and can be maintained through time.
http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity		b is a continuant fiat boundary = Def. b is an immaterial entity that is of zero, one or two dimensions and does not include a spatial region as part. (axiom label in BFO2 Reference: [029-001])
http://purl.obolibrary.org/obo/BFO_0000144	process profile	http://purl.obolibrary.org/obo/BFO_0000015	process		b is a process_profile =Def. there is some process c such that b process_profile_of c (axiom label in BFO2 Reference: [093-002])
http://purl.obolibrary.org/obo/BFO_0000145	relational quality	http://purl.obolibrary.org/obo/BFO_0000019	quality		b is a relational quality = Def. for some independent continuants c, d and for some time t: b quality_of c at t & b quality_of d at t. (axiom label in BFO2 Reference: [057-001])
http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label	http://purl.obolibrary.org/obo/IAO_0000009	datum label		A measurement unit label is as a label that is part of a scalar measurement datum and denotes a unit of measure.
http://purl.obolibrary.org/obo/IAO_0000007	action specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity		A directive information entity that describes an action the bearer will take.
http://purl.obolibrary.org/obo/IAO_0000009	datum label	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		A label is a symbol that is part of some other datum and is used to either partially define  the denotation of that datum or to provide a means for identifying the datum as a member of the set of data with the same label
http://purl.obolibrary.org/obo/IAO_0000010	software	http://purl.obolibrary.org/obo/IAO_0000104	plan specification		Software is a plan specification composed of a series of instructions that can be 
interpreted by or directly executed by a processing unit.
http://purl.obolibrary.org/obo/IAO_0000030	information content entity	http://purl.obolibrary.org/obo/BFO_0000031	generically dependent continuant		A generically dependent continuant that is about some thing.
http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A scalar measurement datum is a measurement datum that is composed of two parts, numerals and a unit label.
http://purl.obolibrary.org/obo/IAO_0000033	directive information entity	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An information content entity whose concretizations indicate to their bearer how to realize them in a process.
http://purl.obolibrary.org/obo/IAO_0000037	dot plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		A dot plot is a report graph which is a graphical representation of data where each data point is represented by a single dot placed on coordinates corresponding to data point values in particular dimensions.
http://purl.obolibrary.org/obo/IAO_0000038	graph	http://purl.obolibrary.org/obo/IAO_0000309	diagram		A diagram that presents one or more tuples of information by mapping those tuples in to a two dimensional space in a non arbitrary way.
http://purl.obolibrary.org/obo/IAO_0000064	algorithm	http://purl.obolibrary.org/obo/IAO_0000104	plan specification		A plan specification which describes the inputs and output of mathematical functions as well as workflow of execution for achieving an predefined objective. Algorithms are realized usually by means of implementation as computer programs for execution by automata.
http://purl.obolibrary.org/obo/IAO_0000065	software interpreter	http://purl.obolibrary.org/obo/IAO_0000064	algorithm		A software interpreter is a software application that executes some specified input software.
http://purl.obolibrary.org/obo/IAO_0000078	curation status specification	http://purl.obolibrary.org/obo/IAO_0000102	data about an ontology part		The curation status of the term. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
http://purl.obolibrary.org/obo/IAO_0000079	density plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		A density plot is a report graph which is a graphical representation of data where the tint of a particular pixel corresponds to some kind of function corresponding the the amount of data points relativelly with their distance from the the pixel.
http://purl.obolibrary.org/obo/IAO_0000101	image	http://purl.obolibrary.org/obo/IAO_0000308	figure		An image is an affine projection to a two dimensional surface, of measurements of some quality of an entity or entities repeated at regular intervals across a spatial range, where the measurements are represented as color and luminosity on the projected on surface.
http://purl.obolibrary.org/obo/IAO_0000102	data about an ontology part	http://purl.obolibrary.org/obo/IAO_0000027	data item		Data about an ontology part is a data item about a part of an ontology, for example a term
http://purl.obolibrary.org/obo/IAO_0000104	plan specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity		A directive information entity with action specifications and objective specifications as parts, and that may be concretized as a realizable entity that, if realized, is realized in a process in which the bearer tries to achieve the objectives by taking the actions specified.
http://purl.obolibrary.org/obo/IAO_0000109	measurement datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A measurement datum is an information content entity that is a recording of the output of a measurement such as produced by a device.
http://purl.obolibrary.org/obo/IAO_0000140	setting datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A settings datum is a datum that denotes some configuration of an instrument.
http://purl.obolibrary.org/obo/IAO_0000144	conclusion textual entity	http://purl.obolibrary.org/obo/IAO_0000300	textual entity		A textual entity that expresses the results of reasoning about a problem, for instance as typically found towards the end of scientific papers.
http://purl.obolibrary.org/obo/IAO_0000178	material information bearer	http://purl.obolibrary.org/obo/BFO_0000040	material entity		A material entity in which a concretization of an information content entity inheres.
http://purl.obolibrary.org/obo/IAO_0000179	histogram	http://purl.obolibrary.org/obo/IAO_0000038	graph		A histogram is a report graph which is a statistical description of a
distribution in terms of occurrence frequencies of different event classes.
http://purl.obolibrary.org/obo/IAO_0000180	heatmap	http://purl.obolibrary.org/obo/IAO_0000038	graph		A heatmap is a report graph which is a graphical representation of data
where the values taken by a variable(s) are shown as colors in a
two-dimensional map.
http://purl.obolibrary.org/obo/IAO_0000181	Venn diagram	http://purl.obolibrary.org/obo/IAO_0000038	graph		A Venn diagram is a report graph showing all hypothetically possible
logical relations between a finite collection of sets.
http://purl.obolibrary.org/obo/IAO_0000183	dendrogram	http://purl.obolibrary.org/obo/IAO_0000038	graph		A dendrogram is a report graph which is a tree diagram
frequently used to illustrate the arrangement of the clusters produced by a
clustering algorithm.
http://purl.obolibrary.org/obo/IAO_0000185	photograph	http://purl.obolibrary.org/obo/IAO_0000101	image		A photograph is created by projecting an image onto a photosensitive surface such as a chemically treated plate or film, CCD receptor, etc.
http://purl.obolibrary.org/obo/IAO_0000225	obsolescence reason specification	http://purl.obolibrary.org/obo/IAO_0000102	data about an ontology part		The reason for which a term has been deprecated. The allowed values come from an enumerated list of predefined terms. See the specification of these instances for more detailed definitions of each enumerated value.
http://purl.obolibrary.org/obo/IAO_0000306	table	http://purl.obolibrary.org/obo/IAO_0000300	textual entity		A textual entity that contains a two-dimensional arrangement of texts repeated at regular intervals across a spatial range, such that the spatial relationships among the constituent texts expresses propositions
http://purl.obolibrary.org/obo/IAO_0000308	figure	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An information content entity consisting of a two dimensional arrangement of information content entities such that the arrangement itself is about something.
http://purl.obolibrary.org/obo/IAO_0000309	diagram	http://purl.obolibrary.org/obo/IAO_0000308	figure		A figure that expresses one or more propositions
http://purl.obolibrary.org/obo/IAO_0000310	document	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		A collection of information content entities intended to be understood together as a whole
http://purl.obolibrary.org/obo/IAO_0000400	cartesian spatial coordinate datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A cartesian spatial coordinate datum is a representation of a point in a spatial region, in which equal changes in the magnitude of a coordinate value denote length qualities with the same magnitude
http://purl.obolibrary.org/obo/IAO_0000401	one dimensional cartesian spatial coordinate datum	http://purl.obolibrary.org/obo/IAO_0000400	cartesian spatial coordinate datum		A cartesion spatial coordinate datum that  uses one value to specify a position along a one dimensional spatial region
http://purl.obolibrary.org/obo/IAO_0000402	two dimensional cartesian spatial coordinate datum	http://purl.obolibrary.org/obo/IAO_0000400	cartesian spatial coordinate datum		A cartesion spatial coordinate datum that  uses two values to specify a position within a two dimensional spatial region
http://purl.obolibrary.org/obo/IAO_0000403	three dimensional cartesian spatial coordinate datum	http://purl.obolibrary.org/obo/IAO_0000400	cartesian spatial coordinate datum		A cartesion spatial coordinate datum that  uses three values to specify a position within a three dimensional spatial region
http://purl.obolibrary.org/obo/IAO_0000408	length measurement datum	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		A scalar measurement datum that is the result of measurement of length quality
http://purl.obolibrary.org/obo/IAO_0000409	denotator type	http://purl.obolibrary.org/obo/IAO_0000102	data about an ontology part		A denotator type indicates how a term should be interpreted from an ontological perspective.
http://purl.obolibrary.org/obo/IAO_0000414	mass measurement datum	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		A scalar measurement datum that is the result of measurement of mass quality
http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		A scalar measurement datum that is the result of measuring a temporal interval
http://purl.obolibrary.org/obo/IAO_0000572	documenting	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process in which a document is created or added to by including the specified input in it.
http://purl.obolibrary.org/obo/IAO_0000591	software method	http://purl.obolibrary.org/obo/IAO_0000010	software		A software method (also called subroutine, subprogram, procedure, method, function, or routine) is software designed to execute a specific task.
http://purl.obolibrary.org/obo/IAO_0000592	software module	http://purl.obolibrary.org/obo/IAO_0000010	software		A software module is software composed of a collection of software methods.
http://purl.obolibrary.org/obo/IAO_0000593	software library	http://purl.obolibrary.org/obo/IAO_0000010	software		A software library is software composed of a collection of software modules and/or software methods in a form that can be statically or dynamically linked to some software application.
http://purl.obolibrary.org/obo/IAO_0000594	software application	http://purl.obolibrary.org/obo/IAO_0000010	software		A software application is software that can be directly executed by some processing unit.
http://purl.obolibrary.org/obo/IAO_0000595	software script	http://purl.obolibrary.org/obo/IAO_0000010	software		A software script is software whose instructions can be executed using a software interpreter.
http://purl.obolibrary.org/obo/OBI_0000010	fluorescent reporter intensity	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum that represents the output of a scanner measuring the intensity value for each fluorescent reporter.
http://purl.obolibrary.org/obo/OBI_0000011	planned process	http://purl.obolibrary.org/obo/BFO_0000015	process		A process that realizes a plan which is the concretization of a plan specification.
http://purl.obolibrary.org/obo/OBI_0000015	biological feature identification objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		Biological_feature_identification_objective is an objective role carried out by the proposition defining the aim of a study designed to examine or characterize a particular biological feature.
http://purl.obolibrary.org/obo/OBI_0000047	processed material	http://purl.obolibrary.org/obo/BFO_0000040	material entity		Is a material entity that is created or changed during material processing.
http://purl.obolibrary.org/obo/OBI_0000054	ratio of collected to emitted light	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum measuring the amount of light collected s compared to the total amount of emitted light in the detector component of a flow cytometer instrument. The datum has a qualitative role
http://purl.obolibrary.org/obo/OBI_0000066	investigation	http://purl.obolibrary.org/obo/OBI_0000011	planned process		a planned process that consists of parts: planning, study design execution, documentation and which produce conclusion(s).
http://purl.obolibrary.org/obo/OBI_0000067	evaluant role	http://purl.obolibrary.org/obo/BFO_0000023	role		a role that inheres in a material entity that is realized in an assay in which data is generated about the bearer of the evaluant role
http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item which is used to indicate the degree of uncertainty about a measurement.
http://purl.obolibrary.org/obo/OBI_0000078	eMedical record	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An eMedical record is a digital document derived from a computer system used primarily for patient care in a clinical setting.  Not required to be compliant with requirements of 21 CFR Part 11.
http://purl.obolibrary.org/obo/OBI_0000079	culture medium	http://purl.obolibrary.org/obo/OBI_0000047	processed material		a processed material that provides the needed nourishment for microorganisms or cells grown in vitro.
http://purl.obolibrary.org/obo/OBI_0000101	measured expression level	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum that is the outcome of the quantification of an assay for the activity of a gene, or the number of RNA transcripts.
http://purl.obolibrary.org/obo/OBI_0000112	specimen role	http://purl.obolibrary.org/obo/BFO_0000023	role		a role borne by a material entity that is gained during a specimen collection process and that can be realized by use of the specimen in an investigation
http://purl.obolibrary.org/obo/OBI_0000115	intervention design	http://purl.obolibrary.org/obo/OBI_0500000	study design		An intervention design is a study design in which a controlled process applied to the subjects (the intervention) serves as the independent variable manipulated by the experimentalist. The treatment (perturbation or intervention) defined can be defined as a combination of values taken by independent variable manipulated by the experimentalists are applied to the recruited subjects assigned (possibly by applying specific methods) to treatment groups. The specificity of intervention design is the fact that independent variables are being manipulated and a response of the biological system is evaluated via response variables as monitored by possibly a series of assays.
http://purl.obolibrary.org/obo/OBI_0000118	gene list	http://purl.obolibrary.org/obo/IAO_0000100	data set		A data set of the names or identifiers of genes that are the outcome of an analysis or have been put together for the purpose of an analysis.
http://purl.obolibrary.org/obo/OBI_0000119	number of particles in subset	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum measuring the number of subjects in a defined subset in a flow cytometer instrument. The datum has a qualitative role
http://purl.obolibrary.org/obo/OBI_0000125	number of lost events electronic	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum measuring the number of analysis events lost due to errors in data acquisition electronic coincidence in a flow cytometer instrument. The datum has a qualitative role.
http://purl.obolibrary.org/obo/OBI_0000131	molecular feature identification objective	http://purl.obolibrary.org/obo/OBI_0000015	biological feature identification objective		Molecular_feature_identification_objective is a biological_feature_identification_objective role describing a study designed to examine or characterize molecular features of a biological system, e.g. expression profiling, copy number of molecular components, epigenetic modifications.
http://purl.obolibrary.org/obo/OBI_0000172	parameter threshold	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum measuring the minimal signal that must be detected to generate an electrical event, as compared to the maximal detected signal in a flow cytometer instrument. The datum has a qualitative role
http://purl.obolibrary.org/obo/OBI_0000175	p-value	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that represents the probability of obtaining a result at least as extreme as that actually obtained, assuming that the actual value was the result of chance alone.
http://purl.obolibrary.org/obo/OBI_0000185	imaging assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that produces a picture of an entity.
http://purl.obolibrary.org/obo/OBI_0000208	methodology testing objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		Methodology_testing_objective is an objective role carried out by a proposition defining the aim of the study is to examine the effect of using different methodologies.
http://purl.obolibrary.org/obo/OBI_0000235	standard error	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value which is the standard deviations of the sample in a frequency distribution, obtained by dividing the standard deviation by the total number of cases in the frequency distribution.
http://purl.obolibrary.org/obo/OBI_0000242	software testing objective	http://purl.obolibrary.org/obo/OBI_0000208	methodology testing objective		Software_testing_objective is a hardware_optimization role describing a study designed to examine the effects of using different software or software parameters, e.g. data processing software.
http://purl.obolibrary.org/obo/OBI_0000251	cluster	http://purl.obolibrary.org/obo/IAO_0000100	data set		A data set which is a subset of data that are a similar to each other in some way.
http://purl.obolibrary.org/obo/OBI_0000257	DNA extraction	http://purl.obolibrary.org/obo/OBI_0666667	nucleic acid extraction		A DNA extraction is a nucleic acid extraction where the desired output material is DNA.
http://purl.obolibrary.org/obo/OBI_0000268	organism feature identification objective	http://purl.obolibrary.org/obo/OBI_0000015	biological feature identification objective		Organism_feature_identification_objective is a biological_feature_identification_objective role describing a study designed to examine or characterize a biological feature monitored at the level of the organism, e.g. height, weight, stage of development, stage of life cycle.
http://purl.obolibrary.org/obo/OBI_0000269	number of lost events computer	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum recording the number of measurement events lost due to overloading of the analysis chip in a flow cytometer instrument. The datum has a qualitative role
http://purl.obolibrary.org/obo/OBI_0000272	protocol	http://purl.obolibrary.org/obo/IAO_0000104	plan specification		A plan specification which has sufficient level of detail and quantitative information to communicate it between investigation agents, so that different investigation agents will reliably be able to independently reproduce the process.
http://purl.obolibrary.org/obo/OBI_0000274	adding a material entity into a target	http://purl.obolibrary.org/obo/OBI_0000652	material combination		is a process with the objective to place a material entity bearing the 'material to be added role' into a material bearing the 'target of material addition role'.
http://purl.obolibrary.org/obo/OBI_0000319	material to be added role	http://purl.obolibrary.org/obo/BFO_0000023	role		A role of a material entity that is realized in an "adding a material entity into a target" process where the bearer of the role is added into another material entity (the target).
http://purl.obolibrary.org/obo/OBI_0000338	drawing a conclusion based on data	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process in which data gathered in an investigation is evaluated in the context of existing knowledge with the objective to generate more general conclusions or to conclude that the data does not allow one to draw general conclusion
http://purl.obolibrary.org/obo/OBI_0000339	planning	http://purl.obolibrary.org/obo/BFO_0000015	process		a process of creating or modifying a plan specification
http://purl.obolibrary.org/obo/OBI_0000343	inductive reasoning	http://purl.obolibrary.org/obo/OBI_0000338	drawing a conclusion based on data		a interpreting data that is used to ascribe properties or relations to types based on an observation instance (i.e., on a number of observations or experiences); or to formulate laws based on limited observations of recurring phenomenal patterns.
http://purl.obolibrary.org/obo/OBI_0000355	hypothesis driven investigation	http://purl.obolibrary.org/obo/OBI_0000066	investigation		is an investigation with the goal to test one or more hypothesis
http://purl.obolibrary.org/obo/OBI_0000356	hypothesis generating investigation	http://purl.obolibrary.org/obo/OBI_0000066	investigation		is an investigation in which data is generated and analyzed with the purpose of generating new hypothesis
http://purl.obolibrary.org/obo/OBI_0000425	averaging objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		An averaging objective is a data transformation objective where the aim is to perform mean calculations on the input of the data transformation.
http://purl.obolibrary.org/obo/OBI_0000434	adding material objective	http://purl.obolibrary.org/obo/OBI_0000686	material combination objective		is the specification of an objective to add a material into a target material. The adding is asymmetric in the sense that the target material largely retains its identity
http://purl.obolibrary.org/obo/OBI_0000437	analyte measurement objective	http://purl.obolibrary.org/obo/OBI_0000441	assay objective		an assay objective to determine the presence or concentration of an analyte in the evaluant
http://purl.obolibrary.org/obo/OBI_0000441	assay objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		an objective specification to determine a specified type of information about an evaluated entity (the material entity bearing evaluant role)
http://purl.obolibrary.org/obo/OBI_0000443	analyte assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay with the objective to capture information about the presence, concentration, or amount of an analyte in an evaluant.
http://purl.obolibrary.org/obo/OBI_0000444	target of material addition role	http://purl.obolibrary.org/obo/BFO_0000023	role		A role of a material entity that is realized in an "adding a material entity into a target" process where the bearer of the role (the target) receives the addition of another material entity.
http://purl.obolibrary.org/obo/OBI_0000451	normalized data set	http://purl.obolibrary.org/obo/OBCS_0000123	transformed data set		A data set that is produced as the output of a normalization data transformation.
http://purl.obolibrary.org/obo/OBI_0000453	measure function	http://purl.obolibrary.org/obo/BFO_0000034	function		Measure function is a function that is borne by a processed material  and realized in a process in which information about some entity is expressed relative to some reference.
http://purl.obolibrary.org/obo/OBI_0000455	consume data function	http://purl.obolibrary.org/obo/BFO_0000034	function		Process data function is a function that is borne by in a material entity by virtue of its structure. When realized the material entity consumes data.
http://purl.obolibrary.org/obo/OBI_0000471	study design execution	http://purl.obolibrary.org/obo/OBI_0000011	planned process		a planned process that carries out a study design
http://purl.obolibrary.org/obo/OBI_0000639	material separation objective	http://purl.obolibrary.org/obo/OBI_0000456	material transformation objective		is an objective to transform a material entity into spatially separated components.
http://purl.obolibrary.org/obo/OBI_0000649	data set of features	http://purl.obolibrary.org/obo/OBCS_0000218	derived data from statistical analysis		A data set that is produced as the output of a descriptive statistical calculation data transformation and consists of producing a data set that represents one or more features of interest about the input data set.
http://purl.obolibrary.org/obo/OBI_0000650	differential expression analysis data transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A differential expression analysis data transformation is a data transformation that has an objective of differential expression analysis.  Frequently this data transformation involves summarizing or otherwise aggregating signals from various samples categorized into groups, and calculating measures of group differences from these aggregated signals.
http://purl.obolibrary.org/obo/OBI_0000651	urine specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		a portion of urine collected from an organism
http://purl.obolibrary.org/obo/OBI_0000652	material combination	http://purl.obolibrary.org/obo/OBI_0000094	material processing		is a material processing with the objective to combine two or more material entities as input into a single material entity as output.
http://purl.obolibrary.org/obo/OBI_0000653	fuzzy clustering objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A fuzzy clustering objective is a data transformation objective where the aim is to assign input objects (typically vectors of attributes) a probability that a point belongs to a class, where the number of class and their specifications are not known a priori.
http://purl.obolibrary.org/obo/OBI_0000655	blood specimen	http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen		a material entity derived from a portion of blood collected from an organism
http://purl.obolibrary.org/obo/OBI_0000656	data set of predicted values according to fitted curve	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data set which is the output of a curve fitting data transformation in which the aim is to find a curve which matches a series of data points and possibly other constraints.
http://purl.obolibrary.org/obo/OBI_0000660	background corrected data set	http://purl.obolibrary.org/obo/OBCS_0000123	transformed data set		A data set that is produced as the output of a background correction data transformation.
http://purl.obolibrary.org/obo/OBI_0000662	error corrected data set	http://purl.obolibrary.org/obo/OBCS_0000123	transformed data set		A data set that is produced as the output of an error correction data transformation and consists of producing a data set which has had erroneous contributions from the input to the data transformation removed (corrected for).
http://purl.obolibrary.org/obo/OBI_0000666	background correction data transformation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A background correction data transformation (sometimes called supervised classification) is a data transformation that has the objective background correction.
http://purl.obolibrary.org/obo/OBI_0000668	error correction data transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		An error correction data transformation is a data transformation that has the objective of error correction, where the aim is to remove (correct for) erroneous contributions from the input to the data transformation.
http://purl.obolibrary.org/obo/OBI_0000671	sample from organism	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		a material obtained from an organism in order to be a representative of the whole
http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A statistical hypothesis test data transformation is a data transformation that has objective statistical hypothesis test.
http://purl.obolibrary.org/obo/OBI_0000676	reduced dimension data set	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data set that is produced as the output of a data vector reduction data transformation and consists of producing a data set which has fewer vectors than the input data set.
http://purl.obolibrary.org/obo/OBI_0000678	portioning objective	http://purl.obolibrary.org/obo/OBI_0000639	material separation objective		A material separation objective aiming to separate material into multiple portions, each of which contains a similar composition of the input material.
http://purl.obolibrary.org/obo/OBI_0000681	separation into different composition objective	http://purl.obolibrary.org/obo/OBI_0000639	material separation objective		A material separation objective aiming to separate a material entity that has parts of different types, and end with at least one output that is a material with parts of fewer types (modulo impurities).
http://purl.obolibrary.org/obo/OBI_0000684	specimen collection objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		A objective specification to obtain a material entity for potential use as an input during an investigation.
http://purl.obolibrary.org/obo/OBI_0000686	material combination objective	http://purl.obolibrary.org/obo/OBI_0000456	material transformation objective		is an objective to obtain an output material that contains several input materials.
http://purl.obolibrary.org/obo/OBI_0000704	decision tree induction objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A decision tree induction objective is a data transformation objective in which a tree-like graph of edges and nodes is created and from which the selection of each branch requires that some type of logical decision is made.
http://purl.obolibrary.org/obo/OBI_0000707	decision tree building data transformation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A decision tree building data transformation is a data transformation that has objective decision tree induction.
http://purl.obolibrary.org/obo/OBI_0000726	peak matching	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		Peak matching is a data transformation performed on a dataset of a graph of ordered data points (e.g. a spectrum) with the objective of pattern matching local maxima above a noise threshold
http://purl.obolibrary.org/obo/OBI_0000739	Student's t-test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		Studen't t-test is a data transformation with the objective of a statistical hypothesis test in which the test statistic has a Student's t distribution if the null hypothesis is true. It is applied when the population is assumed to be normally distributed but the sample sizes are small enough that the statistic on which inference is based is not normally distributed because it relies on an uncertain estimate of standard deviation rather than on a precisely known value.
http://purl.obolibrary.org/obo/OBI_0000740	material sample role	http://purl.obolibrary.org/obo/OBI_0000112	specimen role		A material sample role is a specimen role borne by a material entity that is the output of a material sampling process.
http://purl.obolibrary.org/obo/OBI_0000741	topologically preserved clustered data set	http://purl.obolibrary.org/obo/OBI_0000648	clustered data set		A clustered data set in which the topology, i.e. the spatial properties between data points, is preserved from the original input data from which it was derived.
http://purl.obolibrary.org/obo/OBI_0000789	survival rate	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement data that represents the percentage of people or animals in a study or treatment group who are alive for a given period of time after diagnosis or initiation of monitoring.
http://purl.obolibrary.org/obo/OBI_0000792	statistical model validation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A data transformation which assesses how the results of a statistical analysis will generalize to an independent data set.
http://purl.obolibrary.org/obo/OBI_0000806	material maintenance objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		An objective specification maintains some or all of the qualities of a material over time.
http://purl.obolibrary.org/obo/OBI_0000811	primary structure of DNA macromolecule	http://purl.obolibrary.org/obo/SO_0000001	region		a quality of a DNA molecule that inheres in its bearer due to the order of its DNA nucleotide residues.
http://purl.obolibrary.org/obo/OBI_0000832	measurement device	http://purl.obolibrary.org/obo/OBI_0000968	device		A device in which a measure function inheres.
http://purl.obolibrary.org/obo/OBI_0000838	material maintenance	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process with the objective to maintain some or all of the characteristics of an input material over time.
http://purl.obolibrary.org/obo/OBI_0000861	Likelihood-ratio test	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		Likelihood-ratio is a data transformation which tests whether there is evidence of the need to move from a simple model to a more complicated one (where the simple model is nested within the complicated one); tests of the goodness-of-fit between two models.
http://purl.obolibrary.org/obo/OBI_0000868	pattern matching objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A pattern matching objective aims to detect the presence of the constituents of a given pattern. In contrast to pattern recognition, the pattern is rigidly specified. Patterns are typicall sequences or trees.
http://purl.obolibrary.org/obo/OBI_0000873	pre-mortem specimen	http://purl.obolibrary.org/obo/OBI_0001506	specimen with pre- or post-mortem status		a specimen that was taken from a live organism
http://purl.obolibrary.org/obo/OBI_0000931	study intervention	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process that is the part of the execution of an intervention design study which is varied between two or more subjects in the study.
http://purl.obolibrary.org/obo/OBI_0000951	compound treatment design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		an intervention design in which the treatment is the administration of a compound
http://purl.obolibrary.org/obo/OBI_0000953	processed specimen	http://purl.obolibrary.org/obo/OBI_0100051	specimen		A specimen that has been intentionally physically modified.
http://purl.obolibrary.org/obo/OBI_0000963	categorical label	http://purl.obolibrary.org/obo/IAO_0000009	datum label		A label that is part of a categorical datum and that indicates the value of the data item on the categorical scale.
http://purl.obolibrary.org/obo/OBI_0000973	sequence data	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum that representing the primary structure of a macromolecule(it's sequence) sometimes associated with an indicator of confidence of that measurement.
http://purl.obolibrary.org/obo/OBI_0000976	handedness categorical measurement datum	http://purl.obolibrary.org/obo/OBI_0000938	categorical measurement datum		A datum used to record the answer to a self assessment of whether a person uses their left hand, right hand primarily or each hand equally
http://purl.obolibrary.org/obo/OBI_0000984	dose	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum that measures the quantity of something that may be administered to an organism or that an organism may be exposed to. Quantities of nutrients, drugs, vaccines and toxins are referred to as doses.
http://purl.obolibrary.org/obo/OBI_0000985	growth condition intervention design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		A study design in which the independent variable is the environmental condition in which the specimen is growing
http://purl.obolibrary.org/obo/OBI_0000991	Edinburgh score	http://purl.obolibrary.org/obo/OBI_0000970	scalar score from composite inputs		A score that measures the dominance of a person's right or left hand in everyday activities.
http://purl.obolibrary.org/obo/OBI_0000995	administration of material to specimen	http://purl.obolibrary.org/obo/OBI_0000274	adding a material entity into a target		The directed combination of a material entity with a specimen.
http://purl.obolibrary.org/obo/OBI_0000997	growth environment	http://purl.obolibrary.org/obo/BFO_0000040	material entity		The collection of material entities and their qualities that are located near a live organism, tissue or cell and can influence its growth.
http://purl.obolibrary.org/obo/OBI_0001010	nucleic acid extract	http://purl.obolibrary.org/obo/OBI_0000953	processed specimen		An extract that is the output of an extraction process in which nucleic acid molecules are isolated from a specimen.
http://purl.obolibrary.org/obo/OBI_0001028	feature extraction	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A planed process with objective of obtaining quantified values from an image.
http://purl.obolibrary.org/obo/OBI_0001051	DNA extract	http://purl.obolibrary.org/obo/OBI_0001010	nucleic acid extract		The output of an extraction process in which DNA molecules are purified in order to exclude DNA from organellas.
http://purl.obolibrary.org/obo/OBI_0001144	binding constant	http://purl.obolibrary.org/obo/OBI_0003142	quantitative binding datum		A quantitative binding datum that is expressed as a scalar number and a unit, which can be utilized in equations that model the binding process independent of the specific assay performed.
http://purl.obolibrary.org/obo/OBI_0001151	genetically modified material	http://purl.obolibrary.org/obo/OBI_0000047	processed material		a material entity, organism or cell,  that is the output of a genetic transformation process.
http://purl.obolibrary.org/obo/OBI_0001153	genetic transformation objective	http://purl.obolibrary.org/obo/OBI_0000456	material transformation objective		a material transformation objective aims to create genetically modified organism or cell
http://purl.obolibrary.org/obo/OBI_0001155	3D structural organization datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum that describes the structural orientation of a material entity in 3D space.
http://purl.obolibrary.org/obo/OBI_0001156	age since planting measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since planting, the process of placing a plant in media (e.g. soil) to allow it to grow, which excludes sowing.
http://purl.obolibrary.org/obo/OBI_0001157	age since hatching measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since hatching, the process of emergence from an egg.
http://purl.obolibrary.org/obo/OBI_0001159	age since egg laying measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since egg laying, the process of the production of egg(s) by an organism.
http://purl.obolibrary.org/obo/OBI_0001161	age since germination measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since germination, the process consisting of physiological and developmental changes by a seed, spore, pollen grain (microspore), or zygote that occur after release from dormancy, and encompassing events prior to and including the first visible indications of growth.
http://purl.obolibrary.org/obo/OBI_0001163	age since eclosion measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since eclosion, the process of emergence of an adult insect from its pupa or cocoon.
http://purl.obolibrary.org/obo/OBI_0001164	age since sowing measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since sowing, the process of placing a seed or spore in some media with the intention to invoke germination.
http://purl.obolibrary.org/obo/OBI_0001165	age since coitus measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since coitus, the process of copulation that occurs during the process of sexual reproduction.
http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum		A time measurement datum that is the result of measurement of age of an organism
http://purl.obolibrary.org/obo/OBI_0001168	age since fertilization measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since fertilization, the process of the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote.
http://purl.obolibrary.org/obo/OBI_0001169	age since birth measurement datum	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum that is the result of the measurement of the age of an organism since birth, the process of emergence and separation of offspring from the mother.
http://purl.obolibrary.org/obo/OBI_0001172	dose response curve	http://purl.obolibrary.org/obo/IAO_0000573	line graph		A data item of paired values, one indicating the dose of a material, the other quantitating a measured effect at that dose. The dosing intervals are chosen so that effect values be interpolated by a plotting a curve.
http://purl.obolibrary.org/obo/OBI_0001180	half maximal effective concentration (EC50)	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		half maximal effective concentration (EC50) is a scalar measurement datum corresponding to the concentration of a compound which induces a response halfway between the baseline and maximum after some specified exposure time.
http://purl.obolibrary.org/obo/OBI_0001181	binding datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that states if two or more material entities have the disposition to form a complex, and if so, how strong that disposition is.
http://purl.obolibrary.org/obo/OBI_0001182	negative binding datum	http://purl.obolibrary.org/obo/OBI_0003141	categorical binding datum		A categorical binding datum that states that there is no significant disposition of two or more entities to form a complex.
http://purl.obolibrary.org/obo/OBI_0001191	half maximal inhibitory concentration (IC50)	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		Half maximal inhibitory concentration (IC50) is a scalar measurement datum that measures the effectiveness of a compound to competitively inhibit a given process, and corresponds to the concentration of the compound at which it reaches half of its maximum inhibitory effect.
http://purl.obolibrary.org/obo/OBI_0001214	normalization testing design	http://purl.obolibrary.org/obo/OBI_0500000	study design		A study design that tests different normalization procedures.
http://purl.obolibrary.org/obo/OBI_0001225	genetic population background information	http://purl.obolibrary.org/obo/OBI_0001404	genetic characteristics information		a genetic characteristics information which is a part of genotype information that identifies the population of organisms
http://purl.obolibrary.org/obo/OBI_0001234	epigenetic modification identification objective	http://purl.obolibrary.org/obo/OBI_0000131	molecular feature identification objective		A molecular feature identification objective that aims to detect epigenetic modifications, such as DNA methylation, histone modifications.
http://purl.obolibrary.org/obo/OBI_0001265	FWER adjusted p-value	http://purl.obolibrary.org/obo/OBI_0000662	error corrected data set		A quantitative confidence value resulting from a multiple testing error correction method which adjusts the p-value used as input to control for Type I error in the context of multiple pairwise tests
http://purl.obolibrary.org/obo/OBI_0001294	wild type organism genotype information	http://purl.obolibrary.org/obo/OBI_0001305	genotype information		a genotype information about an organism and includes information that there are no known modifications to the genetic background. Generally it is the genotype information of a representative individual from a class of organisms.
http://purl.obolibrary.org/obo/OBI_0001305	genotype information	http://purl.obolibrary.org/obo/OBI_0001404	genetic characteristics information		a genetic characteristics information that is about the genetic material of an organism and minimally includes information about the genetic background and can in addition contain information about specific alleles, genetic modifications, etc.
http://purl.obolibrary.org/obo/OBI_0001352	allele information	http://purl.obolibrary.org/obo/OBI_0001364	genetic alteration information		a genetic alteration information that about one of two or more alternative forms of a gene or marker sequence and differing from other alleles at one or more mutational sites based on sequence. Polymorphisms are included in this definition.
http://purl.obolibrary.org/obo/OBI_0001358	post-transcriptional modification design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		A study design in which a modification of the transcriptome, proteome (not genome) is made, for example RNAi, antibody targeting.
http://purl.obolibrary.org/obo/OBI_0001364	genetic alteration information	http://purl.obolibrary.org/obo/OBI_0001404	genetic characteristics information		a genetic characteristics information that is about known changes or the lack thereof from the genetic background, including allele information, duplication, insertion, deletion, etc.
http://purl.obolibrary.org/obo/OBI_0001369	wild type allele information	http://purl.obolibrary.org/obo/OBI_0001352	allele information		an allele information that is about the allele found most frequently in natural populations, or in standard laboratory stocks for a given organism.
http://purl.obolibrary.org/obo/OBI_0001396	stimulus or stress design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		A study design in which the response of an organism(s) to the stress or stimulus is studied, e.g. osmotic stress, heat shock, radiation exposure, behavioral treatment etc.
http://purl.obolibrary.org/obo/OBI_0001404	genetic characteristics information	http://purl.obolibrary.org/obo/IAO_0000027	data item		a data item that is about genetic material including polymorphisms, disease alleles, and haplotypes.
http://purl.obolibrary.org/obo/OBI_0001418	dose response design	http://purl.obolibrary.org/obo/OBI_0000951	compound treatment design		A study design that examines the relationship between the size of the administered dose and the extent of the response.
http://purl.obolibrary.org/obo/OBI_0001460	genetic modification design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		A study design in which an organism(s) is studied that has had genetic material removed, rearranged, mutagenized or added, such as in a knock out.
http://purl.obolibrary.org/obo/OBI_0001474	lowess group transformation	http://purl.obolibrary.org/obo/OBI_0001477	lowess transformation		A lowess transformation where a potentially different normalization curve is generated and used for two or more groups (delineated by some criteria); criteria could include blocks (e.g. print-tip groups) on an array, or the day on which mass spectrometry was performed.
http://purl.obolibrary.org/obo/OBI_0001477	lowess transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A data transformation of normalizing ratio data by using a locally weighted polynomial regression (typically after a log transformation). The regression can be performed on log ratios resulting from the relation of two data sets versus the average log intensity data from the same two data sets or it can be performed on raw or log transformed values from one data set versus values from another. The goal could be to remove intensity-dependent dye-specific effects from the set of pair wise ratios. This method can be applied globally, or limited by one or more specified criteria.
http://purl.obolibrary.org/obo/OBI_0001481	lowess global transformation	http://purl.obolibrary.org/obo/OBI_0001477	lowess transformation		A lowess transformation where the same normalization curve is used for all members of the data set; e.g. Features on an array, picked spots on a gel, or measured metabolites in a sample.
http://purl.obolibrary.org/obo/OBI_0001506	specimen with pre- or post-mortem status	http://purl.obolibrary.org/obo/OBI_0100051	specimen		A specimen that has been established to be taken from a live (pre-mortem) or dead (post-mortem) organism.
http://purl.obolibrary.org/obo/OBI_0001514	minimal inhibitory concentration	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		A scalar measurement datum that indicates the lowest concentration at which a specific compound significantly inhibits a process from occurring compared to in the absence of the compound.
http://purl.obolibrary.org/obo/OBI_0001522	sequence assembly algorithm	http://purl.obolibrary.org/obo/IAO_0000064	algorithm		An algorithm used to assemble individual sequence reads into larger contiguous sequences (contigs).  Assembly details include but are not limited to assembler type (overlap-layout-consensus, deBruijn), assembler version, and any relevant quality control information such as per cent known genes/ESTs captured.
http://purl.obolibrary.org/obo/OBI_0001525	PDB file	http://purl.obolibrary.org/obo/OBI_0001155	3D structural organization datum		A 3d structural organization datum capturing the results of X-ray crystallography or NMR experiment that is formatted as specified by the Protein Databank (http://www.wwpdb.org/docs.html). A PDB file can describe the structure of multiple molecules, each of which has a different chain identifier assigned.
http://purl.obolibrary.org/obo/OBI_0001536	equilibrium dissociation constant (KD)	http://purl.obolibrary.org/obo/OBI_0001144	binding constant		A binding constant defined as the ratio of kon over koff (on-rate of binding divided by off-rate)
http://purl.obolibrary.org/obo/OBI_0001546	comparative phenotypic assessment	http://purl.obolibrary.org/obo/OBI_0001834	drawing a conclusion		Interpreting data from assays that evaluate the qualities or dispositions inhering in an organism or organism part and comparing it to data from other organisms to make a conclusion about a phenotypic difference
http://purl.obolibrary.org/obo/OBI_0001548	equilibrium association constant (KA)	http://purl.obolibrary.org/obo/OBI_0001144	binding constant		A binding constant defined as the ratio of koff over kon (off-rate of binding divided by on-rate)
http://purl.obolibrary.org/obo/OBI_0001554	rate measurement datum	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		A scalar measurement datum that represents the number of events occuring over a time interval
http://purl.obolibrary.org/obo/OBI_0001571	equilibrium dissociation constant (KD) approximated by IC50	http://purl.obolibrary.org/obo/OBI_0003144	IC50 binding datum		A measurement of an IC50 value under specific assay conditions approximates KD, namely the binding reaction is at an equilibrium, there is a single population of sites on the receptor that competitor and ligand are binding to, and the concentration of the receptor must be much less than the KD for the competitor and the ligand.  In this case, according to Cheng and Prussoff, KD = IC50 / (1 + Lstot / KDs), in which Lstot is the total concentration of the labeled competitor and KDs is the KD value of that competitor.
http://purl.obolibrary.org/obo/OBI_0001573	DNA sequence data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		A sequence data item that is about the primary structure of DNA
http://purl.obolibrary.org/obo/OBI_0001575	assigning gene property based on phenotypic assessment	http://purl.obolibrary.org/obo/OBI_0000338	drawing a conclusion based on data		Interpreting data from assays that evaluate the qualities or dispositions inhering in an organism or organism part and comparing it to data from other organisms that have a defined genetic difference, and assigning a property to the product of the targeted gene as a result.
http://purl.obolibrary.org/obo/OBI_0001581	equilibrium dissociation constant (KD) approximated by EC50	http://purl.obolibrary.org/obo/OBI_0003143	EC50 binding datum		A measurement of an EC50 value under specific assay conditions approximates KD, namely the binding reaction is at an equilibrium,  and the concentration of the receptor must be much less than the KD for the ligand.
http://purl.obolibrary.org/obo/OBI_0001583	half life of binding datum	http://purl.obolibrary.org/obo/OBI_0001171	half life datum (t 1/2)		A half life datum of the time it takes for 50% of bound complexes in an ensemble to disassociate in absence of re-association.
http://purl.obolibrary.org/obo/OBI_0001588	binding	http://purl.obolibrary.org/obo/GO_0008150	biological_process		The process of material entities forming complexes.
http://purl.obolibrary.org/obo/OBI_0001596	PDB file chain	http://purl.obolibrary.org/obo/OBI_0001155	3D structural organization datum		A 3D structural organization datum that is part of a PDB file and has a specific chain identifier that identifies the entire information on a subset of the material entities.
http://purl.obolibrary.org/obo/OBI_0001603	binding off rate measurement datum (koff)	http://purl.obolibrary.org/obo/OBI_0001554	rate measurement datum		A rate measurement datum of how quickly bound complexes disassociate
http://purl.obolibrary.org/obo/OBI_0001605	binding on rate measurement datum (kon)	http://purl.obolibrary.org/obo/OBI_0001554	rate measurement datum		A rate measurement datum of how quickly bound complexes form
http://purl.obolibrary.org/obo/OBI_0001618	average depth of sequence coverage	http://purl.obolibrary.org/obo/OBI_0000679	average value		An average value of the depth of sequence coverage based both on external (e.g. Cot-based size estimates) and internal (average coverage in the assembly) measures of genome size.
http://purl.obolibrary.org/obo/OBI_0001834	drawing a conclusion	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process in which new information is inferred from existing information.
http://purl.obolibrary.org/obo/OBI_0001872	sequence assembly process	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation that assembles two or more individual sequence reads into contiguous sequences (i.e., contigs).
http://purl.obolibrary.org/obo/OBI_0001873	number of errors	http://purl.obolibrary.org/obo/OBI_0001933	value specification		a data item that is the number of times that a given process failed, as an integer
http://purl.obolibrary.org/obo/OBI_0001874	random access memory size	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		random access memory size is a scalar measurement datum which denotes the amount of physical memory know as random access memory present of a computer or required by a computational process or data transformation
http://purl.obolibrary.org/obo/OBI_0001909	conclusion based on data	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An information content entity that is inferred from data.
http://purl.obolibrary.org/obo/OBI_0001912	cell freezing medium	http://purl.obolibrary.org/obo/OBI_0000047	processed material		A processed material that serves as a liquid vehicle for freezing cells for long term quiescent stroage, which contains chemicls needed to sustain cell viability across freeze-thaw cycles.
http://purl.obolibrary.org/obo/OBI_0001930	categorical value specification	http://purl.obolibrary.org/obo/OBI_0001933	value specification		A value specification that is specifies one category out of a fixed number of nominal categories
http://purl.obolibrary.org/obo/OBI_0001931	scalar value specification	http://purl.obolibrary.org/obo/OBI_0001933	value specification		A value specification that consists of two parts: a numeral and a unit label
http://purl.obolibrary.org/obo/OBI_0001933	value specification	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An information content entity that specifies a value within a classification scheme or on a quantitative scale.
http://purl.obolibrary.org/obo/OBI_0001939	genome coverage	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item		A data item that is the total number of bases in reads, divided by genome size, assumed to be the reference size (for instance of 3.10 Gb for human and 2.73 Gb for mouse) and refers to the percentage of the genome that is contained in the assembly based on size estimates; these are usually based on cytological techniques. Genome coverage of 90–95% is generally considered to be good, as most genomes contain a considerable fraction of repetitive regions that are difficult to sequence. So it is not a cause for concern if the genome coverage of an assembly is a bit less than 100%.
http://purl.obolibrary.org/obo/OBI_0001941	contig N50	http://purl.obolibrary.org/obo/OBI_0001940	N50		N50 statistic computed for the contigs produced by the assembly process. A contig N50 is calculated by first ordering every contig by length from longest to shortest. Next, starting from the longest contig, the lengths of each contig are summed, until this running sum equals one-half of the total length of all contigs in the assembly. The contig N50 of the assembly is the length of the shortest contig in this list.
http://purl.obolibrary.org/obo/OBI_0001945	scaffold N50	http://purl.obolibrary.org/obo/OBI_0001940	N50		N50 statistic computed for the scaffold produced by the assembly process. The method for computing the value is similar to that of contig N50 but uses scaffold information instead of contig information
http://purl.obolibrary.org/obo/OBI_0001966	sequence library data demultiplexing	http://purl.obolibrary.org/obo/OBI_0200187	sequence analysis data transformation		is a data transformation which uses sequence alignment and  'multiplex identifier sequence' information to separate all reads belonging to a given single sample following the sequencing of a multiplexed library
http://purl.obolibrary.org/obo/OBI_0001968	operational taxonomic unit matrix	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item		Operational Taxonomic Unit matrix  is a data item, organized as a table, where organismal taxonomic units, computed by sequence analysis and genetic distance calculation, are counted in a set of biological or environmental samples. The table is  used to appraise biodiversity of a population or community of living organism.
http://purl.obolibrary.org/obo/OBI_0002020	epigenetic modification assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that identifies epigenetic modifications including histone modifications, open chromatin, and DNA methylation.
http://purl.obolibrary.org/obo/OBI_0002502	cerebrospinal fluid specimen	http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen		A specimen that is derived from cerbrospinal fluid.
http://purl.obolibrary.org/obo/OBI_0002505	milk specimen	http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen		A specimen that is derived from milk.
http://purl.obolibrary.org/obo/OBI_0002508	sputum specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		A specimen that is derived from sputum.
http://purl.obolibrary.org/obo/OBI_0002512	bone marrow specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		A specimen that is derived from bone marrow.
http://purl.obolibrary.org/obo/OBI_0002515	pleural fluid specimen	http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen		A specimen that is derived from pleural fluid.
http://purl.obolibrary.org/obo/OBI_0002534	lung specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		A specimen that is derived from lung.
http://purl.obolibrary.org/obo/OBI_0100026	organism	http://purl.obolibrary.org/obo/BFO_0000040	material entity		A material entity that is an individual living system, such as animal, plant, bacteria or virus, that is capable of replicating or reproducing, growth and maintenance in the right environment. An organism may be unicellular or made up, like humans, of many billions of cells divided into specialized tissues and organs.
http://purl.obolibrary.org/obo/OBI_0100051	specimen	http://purl.obolibrary.org/obo/BFO_0000040	material entity		A material entity that has the specimen role.
http://purl.obolibrary.org/obo/OBI_0200001	geometric mean calculation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A data transformation in which the mean is calculated by taking the nth root of the product of all of the observations in a data (n being the number of all observations).
http://purl.obolibrary.org/obo/OBI_0200002	logistic-log curve fitting	http://purl.obolibrary.org/obo/OBI_0200072	curve fitting data transformation		A logistic-log curve fitting is a curve fitting where a curve of the form y=d+((a-d)/(1+(x/c)^b)) is obtained, where a, b, c, and d are determined so to optimize its fit to the input data points (x_1, y_1), (x_2, y_2), ..., (x_n, y_n).
http://purl.obolibrary.org/obo/OBI_0200003	logit-log curve fitting	http://purl.obolibrary.org/obo/OBI_0200072	curve fitting data transformation		A logit-log curve fitting is a curve fitting where first the limits y_0 an y_infty of y when x->0 and x->infinity, respectively, are estimated from the input data points (x_1, y_1), (x_2,y_2), ..., (x_n, y_n). Then a curve with equation log((y-y_0)/(y_infty-y))=a+b log(x) is obtained, where a and b are determined to optimize its fit to the input data points.
http://purl.obolibrary.org/obo/OBI_0200004	log-log curve fitting	http://purl.obolibrary.org/obo/OBI_0200072	curve fitting data transformation		A log-log curve fitting is a curve fitting where first a logarithmic transformation is applied both to the x and the y coordinates of the input data points (x_1, y_1), (x_2, y_2), ..., (x_n, y_n), and then coefficients a and b are determined to optimize the fit of log(y)=a+b*log(x) to these input data points.
http://purl.obolibrary.org/obo/OBI_0200005	feature extraction objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A feature extraction objective is a data transformation objective where the aim of the data transformation is to generate quantified values from a scanned image.
http://purl.obolibrary.org/obo/OBI_0200006	biexponential transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A biexponential transformation is a data transformation that, for each (one dimensional) real number input x, outputs an approximation (found, e.g. with the Newton's method) to a solution y of the equation B(y)-x=0, where B denotes a b transformation.
http://purl.obolibrary.org/obo/OBI_0200007	box-cox transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A box-cox transformation is a data transformation according to the methods of Box and Cox as described in the article Box, G. E. P. and Cox, D.R. (1964) An analysis of transformations. Journal of Royal Statistical Society, Series B, vol. 26, pp. 211-246.
http://purl.obolibrary.org/obo/OBI_0200008	hyperlog transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A hyperlog transformation ia a data transformation that, for each (one dimensional) real number input x, outputs an approximation (found, e.g. with the Newton's method) to a solution y of the equation EH(y)-x=0, where EH denotes an eh transformation.
http://purl.obolibrary.org/obo/OBI_0200010	loess scale group transformation one-channel	http://purl.obolibrary.org/obo/OBI_0200025	loess scale group transformation		A loess scale group transformation one-channel is a loess scale group transformation consisting in the application of a scale adjustment following a loess group transformation one-channel, to render the M group variances similar.
http://purl.obolibrary.org/obo/OBI_0200011	logical transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A logical transformation is a data transformation that, for each (one dimensional) real number input x, outputs an approximation (found, e.g. with the Newton's method) to a solution y of the equation S(y)-x=0, where S denotes an s transformation.
http://purl.obolibrary.org/obo/OBI_0200012	loess scale group transformation two-channel	http://purl.obolibrary.org/obo/OBI_0200025	loess scale group transformation		A loess scale group transformation two-channel is a loess scale group transformation consisting in the application of a scale adjustment following a loess group transformation two-channel, to render the M group variances similar.
http://purl.obolibrary.org/obo/OBI_0200013	loess global transformation one-channel	http://purl.obolibrary.org/obo/OBI_0200023	loess global transformation		A loess global transformation one-channel is a loess global transformation in the special case where the input is the result of an MA transformation applied to intensities from two related one-channel assays.
http://purl.obolibrary.org/obo/OBI_0200014	split-scale transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A split-scale transformation is a data transformation which is an application of a function f described as follows to a (one dimensional) real number input. f(x)=a*x+b if x=for x>t; where log denotes a logarithmic transformation and a, b, c, d, r, t are real constants, with a, c, d, r, t positive, chosen so that f is continuous with a continuous derivative at the transition point t.
http://purl.obolibrary.org/obo/OBI_0200015	loess global transformation two-channel	http://purl.obolibrary.org/obo/OBI_0200023	loess global transformation		A loess global transformation two-channel is a loess global transformation in the special case where the input the result of an MA transformation applied to intensities from the two channels of a two-channel assay.
http://purl.obolibrary.org/obo/OBI_0200016	sine transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A sine transformation is a data transformation which consists in applying the sine function to a (one dimensional) real number input. The sine function is one of the basic trigonometric functions and a definition is provided, e.g., at http://mathworld.wolfram.com/Sine.html.
http://purl.obolibrary.org/obo/OBI_0200017	cosine transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A cosine transformation is a data transformation which consists in applying the cosine function to a (one dimensional) real number input. The cosine function is one of the basic trigonometric functions and a definition is provided, e.g., at http://mathworld.wolfram.com/Cosine.html.
http://purl.obolibrary.org/obo/OBI_0200018	loess group transformation one-channel	http://purl.obolibrary.org/obo/OBI_0200024	loess group transformation		A loess group transformation one-channel is a loess group transformation in the special case where the input is the result of an MA transformation applied to intensities from two related one-channel assays.
http://purl.obolibrary.org/obo/OBI_0200019	loess group transformation two-channel	http://purl.obolibrary.org/obo/OBI_0200024	loess group transformation		A loess group transformation two-channel is a loess group transformation in the special case where the input is the result of an MA transformation applied to intensities from the two channels of a two-channel assay.
http://purl.obolibrary.org/obo/OBI_0200020	homogeneous polynomial transformation	http://purl.obolibrary.org/obo/OBI_0200093	polynomial transformation		A homogeneous polynomial transformation is a polynomial transformation where all the term of the polynomial have the same degree.
http://purl.obolibrary.org/obo/OBI_0200021	linlog transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A linlog transformation is a data transformation, described in PMID 16646782, whose input is a matrix [y_ik] and whose output is a matrix obtained by applying formula (9) of this paper, where values below an appropriately determined threshold (dependent on the row i) are transformed via a polynomial of degree 1, and values above this threshold are transformed via a logarithm.
http://purl.obolibrary.org/obo/OBI_0200023	loess global transformation	http://purl.obolibrary.org/obo/OBI_0200071	loess transformation		A loess global transformation is a loess transformation where only one loess fitting is performed, utilizing one subset of (or possibly all of) the data points in the input so that there is only one resulting loess curve y=f(x) which is used for the transformation.
http://purl.obolibrary.org/obo/OBI_0200024	loess group transformation	http://purl.obolibrary.org/obo/OBI_0200071	loess transformation		A loess group transformation is a loess transformation where the input is partitioned into groups and for each group a loess fitting is performed, utilizing a subset of (or possibly all of) the data points in that group. Thus, a collection of loess curves y=f_i(x) is generated, one per group. Each (x, y) in the input is transformed into (x, y-f_i(x)), where f_i(x) is the curve corresponding to the group to which that data point belongs.
http://purl.obolibrary.org/obo/OBI_0200025	loess scale group transformation	http://purl.obolibrary.org/obo/OBI_0200185	scaling data transformation		A loess scale group transformation is a data transformation consisting in the application of a scale adjustment following a loess group transformation, to render the group variances for the second variable (y) similar.  Has objective scaling.
http://purl.obolibrary.org/obo/OBI_0200026	total intensity transformation single	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A total intensity transformation single is a data transformation that takes as input an n-dimensional (real) vector and multiplies each component of this vector by a coefficient, where the coefficient is obtained by taking the sum of the input components or of a subset of these, multiplied by a constant of choice.
http://purl.obolibrary.org/obo/OBI_0200027	total intensity transformation paired	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A total intensity transformation paired is a data transformation that takes as input two n-dimensional (real) vectors and multiplies each component of the first vector by a coefficient, where the coefficient is obtained by taking the ratio of the sum of the second input components or of a subset of these by the sum of the first input components or of a subset of these (the same subset is used for the two vectors).
http://purl.obolibrary.org/obo/OBI_0200028	quantile transformation	http://purl.obolibrary.org/obo/OBI_0200181	center calculation data transformation		A quantile transformation is a data transformation that takes as input a collection of data sets, where each can be thought as an n-dimensional (real) vector, and which transforms each data set so that the resulting output data sets have equal quantiles.
http://purl.obolibrary.org/obo/OBI_0200031	differential expression analysis objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A differential expression analysis objective is a data transformation objective whose input consists of expression levels of entities (such as transcripts or proteins), or of sets of such expression levels, under two or more conditions and whose output reflects which of these are likely to have different expression across such conditions.
http://purl.obolibrary.org/obo/OBI_0200032	K-fold cross validation method	http://purl.obolibrary.org/obo/OBI_0000792	statistical model validation		K-fold cross-validation randomly partitions the original sample into K subsamples. Of the K subsamples, a single subsample is retained as the validation data for testing the model, and the remaining K - 1 subsamples are used as training data. The cross-validation process is then repeated K times (the folds), with each of the K subsamples used exactly once as the validation data. The K results from the folds then can be averaged (or otherwise combined) to produce a single estimation. The advantage of this method over repeated random sub-sampling is that all observations are used for both training and validation, and each observation is used for validation exactly once. 10-fold cross-validation is commonly used
http://purl.obolibrary.org/obo/OBI_0200033	leave one out cross validation method	http://purl.obolibrary.org/obo/OBI_0000792	statistical model validation		is a data transformation :  leave-one-out cross-validation (LOOCV) involves using a single observation from the original sample as the validation data, and the remaining observations as the training data. This is repeated such that each observation in the sample is used once as the validation data
http://purl.obolibrary.org/obo/OBI_0200035	boostrapping	http://purl.obolibrary.org/obo/OBI_0000792	statistical model validation		Bootstrapping is a statistical method for estimating the sampling distribution of a statistic by sampling with replacement from the original data, most often with the purpose of deriving robust estimates of standard errors and confidence intervals of a population parameter like a mean, median, proportion, odds ratio, correlation coefficient or regression coefficient
http://purl.obolibrary.org/obo/OBI_0200036	Benjamini and Hochberg false discovery rate correction method	http://purl.obolibrary.org/obo/OBI_0200163	false discovery rate correction method		A data transformation process in which the Benjamini and Hochberg method sequential p-value procedure  is applied with the aim of correcting false discovery rate
http://purl.obolibrary.org/obo/OBI_0200037	pareto scaling	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A pareto scaling is a data transformation that divides all measurements of a variable by the square root of the standard deviation of that variable.
http://purl.obolibrary.org/obo/OBI_0200040	modular decomposition	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		Molecular decomposition is the partition of a network into distinct subgraphs for the purpose of identifying functional clusters. The network data is run through any of several existing algorithms designed to partition a network into distinct subgraphs for the purpose of isolating groups of functionally linked biological elements such as proteins.
http://purl.obolibrary.org/obo/OBI_0200041	k-means clustering	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A k-means clustering is a data transformation which achieves a class discovery or partitioning objective, which takes as input a collection of objects (represented as points in multidimensional space) and which partitions them into a specified number k of clusters. The algorithm attempts to find the centers of natural clusters in the data. The most common form of the algorithm starts by partitioning the input points into k initial sets, either at random or using some heuristic data. It then calculates the mean point, or centroid, of each set. It constructs a new partition by associating each point with the closest centroid. Then the centroids are recalculated for the new clusters, and the algorithm repeated by alternate applications of these two steps until convergence, which is obtained when the points no longer switch clusters (or alternatively centroids are no longer changed).
http://purl.obolibrary.org/obo/OBI_0200042	hierarchical clustering	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A hierarchical clustering is a data transformation which achieves a class discovery objective, which takes as input data item and builds a hierarchy of clusters. The traditional representation of this hierarchy is a tree (visualized by a dendrogram), with the individual input objects at one end (leaves) and a single cluster containing every object at the other (root).
http://purl.obolibrary.org/obo/OBI_0200043	average linkage hierarchical clustering	http://purl.obolibrary.org/obo/OBI_0200154	agglomerative hierarchical clustering		An average linkage hierarchical clustering is an agglomerative hierarchical clustering which generates successive clusters based on a distance measure, where the distance between two clusters is calculated as the average distance between objects from the first cluster and objects from the second cluster.
http://purl.obolibrary.org/obo/OBI_0200044	complete linkage hierarchical clustering	http://purl.obolibrary.org/obo/OBI_0200154	agglomerative hierarchical clustering		an agglomerative hierarchical clustering which generates successive clusters based on a distance measure, where the distance between two clusters is calculated as the maximum distance between objects from the first cluster and objects from the second cluster.
http://purl.obolibrary.org/obo/OBI_0200045	single linkage hierarchical clustering	http://purl.obolibrary.org/obo/OBI_0200154	agglomerative hierarchical clustering		A single linkage hierarchical clustering is an agglomerative hierarchical clustering which generates successive clusters based on a distance measure, where the distance between two clusters is calculated as the minimum distance between objects from the first cluster and objects from the second cluster.
http://purl.obolibrary.org/obo/OBI_0200049	Benjamini and Yekutieli false discovery rate correction method	http://purl.obolibrary.org/obo/OBI_0200163	false discovery rate correction method		A data transformation in which the Benjamini and Yekutieli method is applied with the aim of correcting false discovery rate
http://purl.obolibrary.org/obo/OBI_0200052	probabilistic algorithm	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A probabilistic algorithm is one which involves an element of probability or randomness in the transformation of the data.
http://purl.obolibrary.org/obo/OBI_0200053	expectation maximization	http://purl.obolibrary.org/obo/OBI_0200052	probabilistic algorithm		EM is a probabilistic algorithm used to estimate the maximum likelihood of parameters from existing data where the model involves unobserved latent variables. The input to this method is the data model for which the estimation is performed over and the output is an approximated probability function.
http://purl.obolibrary.org/obo/OBI_0200054	global modularity calculation	http://purl.obolibrary.org/obo/OBI_0200147	network graph quality calculation		A network graph quality calculation in which an input data set of subgraph modules and their in-degree and out-degree qualities is used to calculate the average modularity of subgraphs within the network.
http://purl.obolibrary.org/obo/OBI_0200055	dye swap merge	http://purl.obolibrary.org/obo/OBI_0200057	replicate analysis		A dye swap merge is a replicate analysis which takes as input data from paired two-channel microarray assays where the sample labeled with one dye in the first assay is labeled with the other dye in the second assay and vice versa. The output for each reporter is obtained by combining its (raw or possibly pre-processed) M values in the two assays, where the M value in an assay is defined as the difference of the log intensities in the two channels. This can be used as a normalization step, when appropriate assumptions are met.
http://purl.obolibrary.org/obo/OBI_0200056	moving average	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A moving average is a data transformation in which center calculations, usually mean calculations, are performed on values within a sliding window across the input data set.
http://purl.obolibrary.org/obo/OBI_0200057	replicate analysis	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A replicate analysis is a data transformation in which data from replicates are combined, e.g. through descriptive statistics calculations, and the results might be utilized for a variety of purposes, like assessing reproducibility, identifying outliers, normalizing, etc.
http://purl.obolibrary.org/obo/OBI_0200058	b cell epitope prediction	http://purl.obolibrary.org/obo/OBI_0200187	sequence analysis data transformation		A B cell epitope prediction takes as input an antigen sequence, and through an analysis of this sequence, produces as output a prediction of the likelihood the biomaterial is a B Cell Epitope.
http://purl.obolibrary.org/obo/OBI_0200059	mhc binding prediction	http://purl.obolibrary.org/obo/OBI_0200187	sequence analysis data transformation		An MHC binding prediction takes an input of a biomaterial sequence and through an analysis of this sequence, produces as output a prediction of the likelihood that the biomaterial will bind to an MHC molecule.
http://purl.obolibrary.org/obo/OBI_0200060	t cell epitope prediction	http://purl.obolibrary.org/obo/OBI_0200187	sequence analysis data transformation		A T cell epitope prediction takes as input an antigen sequence, and through an analysis of this sequence, produces as output a prediction of the likelihood the biomaterial is a T cell epitope.
http://purl.obolibrary.org/obo/OBI_0200061	data imputation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		Imputation is a means of filling in missing data values from a predictive distribution of the missing values.  The predictive distribution can be created either based on a formal statistical model (i,e, a multivariate normal distribution) or an algorithm.
http://purl.obolibrary.org/obo/OBI_0200062	continuum mass spectrum analysis	http://purl.obolibrary.org/obo/OBI_0200085	mass spectrometry analysis		A continuum mass spectrum is a data transformation that contains the full profile of the detected signals for a given ion.
http://purl.obolibrary.org/obo/OBI_0200063	characteristic path length calculation	http://purl.obolibrary.org/obo/OBI_0200085	mass spectrometry analysis		Quantifying subgraph navigability based on shortest-path length averaged over all pairs of subgraph vertices
http://purl.obolibrary.org/obo/OBI_0200066	Holm-Bonferroni family-wise error rate correction method	http://purl.obolibrary.org/obo/OBI_0200073	family wise error rate correction method		a data transformation that performs more than one hypothesis test simultaneously, a closed-test procedure, that  controls the familywise error rate for all the k hypotheses at level α in the strong sense. Objective: multiple testing correction
http://purl.obolibrary.org/obo/OBI_0200070	edge weighting	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		Edge weighting is the substitution or transformation of edge length using numerical data.  Data input include a symmetric adjacency matrix for a network and a second data set, for example a list of interactor pairs and a confidence score associated with the experimental detection of each pair's interaction.  Each element in the adjacency matrix is transformed or replaced with the corresponding number in the second data set.  Output data are a modified adjacency matrix reflecting the transformed state of the network.
http://purl.obolibrary.org/obo/OBI_0200071	loess transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A loess transformation is a data transformation that takes as input a collection of real number pairs (x, y) and, after performing (one or more) loess fittings, utilizes the resulting curves to transform each (x, y) in the input into (x, y-f(x)) where f(x) is one of the fitted curves.
http://purl.obolibrary.org/obo/OBI_0200072	curve fitting data transformation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A curve fitting is a data transformation that has objective curve fitting and that consists of finding a curve which matches a series of data points and possibly other constraints.
http://purl.obolibrary.org/obo/OBI_0200074	submatrix extraction	http://purl.obolibrary.org/obo/OBI_0200050	dimensionality reduction		A submatrix extraction is a projection whose input is a matrix and whose output is a matrix obtained by selecting certain rows and columns from the input. (Note that, if one represents the input matrix as a vector obtained by concatenating its rows, then extracting a submatrix is equivalent to projecting this vector into that composed by the entries belonging to the rows and columns of interest from the input matrix.)
http://purl.obolibrary.org/obo/OBI_0200075	row submatrix extraction	http://purl.obolibrary.org/obo/OBI_0200074	submatrix extraction		A row submatrix extraction is a submatrix extraction where all the columns of the input matrix are retained and selection only occurs on the rows.
http://purl.obolibrary.org/obo/OBI_0200076	column submatrix extraction	http://purl.obolibrary.org/obo/OBI_0200074	submatrix extraction		A column submatrix extraction is a submatrix extraction where all the rows of the input matrix are retained and selection only occurs on the columns.
http://purl.obolibrary.org/obo/OBI_0200077	gating	http://purl.obolibrary.org/obo/OBI_0200182	data vector reduction data transformation		Gating is a property-based vector selection with the objective of partitioning a data vector set into vector subsets based on dimension values of individual vectors (events), in which vectors represent individual physical particles (often cells) of a sample and dimension values represent light intensity qualities as measured by flow cytometry.
http://purl.obolibrary.org/obo/OBI_0200078	descriptive statistical calculation objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A descriptive statistical calculation objective is a data transformation objective which concerns any calculation intended to describe a feature of a data set, for example, its center or its variability.
http://purl.obolibrary.org/obo/OBI_0200079	arithmetic mean calculation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		An arithmetic mean calculation is a descriptive statistics calculation in which the mean is calculated by taking the sum of all of the observations in a data set divided by the total number of observations. It gives a measure of the 'center of gravity' for the data set. It is also known as the first moment.
http://purl.obolibrary.org/obo/OBI_0200081	sequence analysis objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A sequence analysis objective is a data transformation objective which aims to analyse some ordered biological data for sequential patterns.
http://purl.obolibrary.org/obo/OBI_0200085	mass spectrometry analysis	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation which has the objective of spectrum analysis.
http://purl.obolibrary.org/obo/OBI_0200086	spread calculation data transformation	http://purl.obolibrary.org/obo/OBI_0200184	descriptive statistical calculation data transformation		A spread calculation is a data transformation that has objective spread calculation.
http://purl.obolibrary.org/obo/OBI_0200088	Kaplan Meier	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		a nonparametric (actuarial) data transformation technique for estimating time-related events. It is a univariate analysis that estimates the probability of the proportion of subjects in remission at a particular time, starting from the initiation of active date (time zero), and takes into account those lost to follow-up or not yet in remission at end of study (censored)
http://purl.obolibrary.org/obo/OBI_0200093	polynomial transformation	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A polynomial transformation is a data transformation that is obtained through a polynomial, where a polynomial is a mathematical expression involving a sum of powers in one or more variables multiplied by coefficients (e.g. see http://mathworld.wolfram.com/Polynomial.html). The number of variables and the degree are properties of a polynomial. The degree of a polynomial is the highest power of its terms, where the terms of a polynomial are the individual summands with the coefficients omitted.
http://purl.obolibrary.org/obo/OBI_0200094	logarithmic transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A logarithmic transformation is a data transformation consisting in the application of the logarithm function with a given base a (where a>0 and a is not equal to 1) to a (one dimensional) positive real number input. The logarithm function with base a can be defined as the inverse of the exponential function with the same base. See e.g. http://en.wikipedia.org/wiki/Logarithm.
http://purl.obolibrary.org/obo/OBI_0200095	exponential transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		An exponential transformation is a data transformation consisting in the application of the exponential function with a given base a (where a>0 and a is typically not equal to 1) to a (one dimensional) real number input. For alternative definitions and properties of this function see, e.g., http://en.wikipedia.org/wiki/Exponential_function and http://en.wikipedia.org/wiki/Characterizations_of_the_exponential_function.
http://purl.obolibrary.org/obo/OBI_0200097	non-negative matrix factorization	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		Non negative matrix factorization is a data transformation in which factorises a matrix and which forces that all elements must be equal to or greater than zero.
http://purl.obolibrary.org/obo/OBI_0200099	discriminant function analysis	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		Discriminant function analysis is a form of discriminant analysis used to determine which variables discriminate between two or more naturally occurring groups. Analysis is used to determine which variable(s) are the best predictors of a particular outcome.
http://purl.obolibrary.org/obo/OBI_0200101	linear discriminant functional analysis	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		Linear discriminant functional analysis (LDFA) is a multivariate technique used in special applications where there are several intact groups (random assignment may be impossible) and they have been measured on several independent measures. Thus, you will want to describe how these groups differ on the basis of these measures. In this case, classification and prediction is the main objective.
http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		Regression analysis is a descriptive statistics technique that examines the relation of a dependent variable (response variable) to specified independent variables (explanatory variables). Regression analysis can be used as a descriptive method of data analysis (such as curve fitting) without relying on any assumptions about underlying processes generating the data.
http://purl.obolibrary.org/obo/OBI_0200103	multiple linear regression analysis	http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method		multiple linear regression is a regression method that models the relationship between a dependent variable Y, independent variables Xi, i = 1, ..., p, and a random term epsilon. The model can be written as
    Y = \beta_0 + \beta_1 X_1 + \beta_2 X_2 + \cdots +\beta_p X_p + \varepsilon
where \beta_0 =  0 is the intercept ("constant" term), the \beta_i s  are the respective parameters of independent variables, and p is the number of parameters to be estimated in the linear regression.
http://purl.obolibrary.org/obo/OBI_0200104	principal component regression	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		The Principal Component Regression method is a regression analysis method that combines the Principal Component Analysis (PCA)spectral decomposition with an Inverse Least Squares (ILS) regression method to create a quantitative model for complex samples. Unlike quantitation methods based directly on Beer's Law which attempt to calculate the absorbtivity coefficients for the constituents of interest from a direct regression of the constituent concentrations onto the spectroscopic responses, the PCR method regresses the concentrations on the PCA scores.
http://purl.obolibrary.org/obo/OBI_0200106	discriminant analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		Discriminant function analysis is used to determine which variables discriminate between two or more naturally occurring groups. Analysis is used to determine which variable(s) are the best predictors of a particular outcome.
http://purl.obolibrary.org/obo/OBI_0200108	eh transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		An eh transformation is a data transformation obtained by applying the function EH described in what follows to a (one dimensional) real number input. EH(x)=exp(x*d/r)+b*(d/r)*x-1, if x>=0, and EH(x)=-exp(-x*d/r)+b*(d/r)*x+1, otherwise. Here exp denotes an exponential transformation and b, d, r are positive real constants with the objective of normalization.
http://purl.obolibrary.org/obo/OBI_0200109	b transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		A b transformation is a data transformation obtained by applying the function B described in what follows to a (one dimensional) real number input. B(x)= a*exp(b*x)-c*exp(-d*x)+f, where exp denotes an exponential transformation and a, b, c, d, f are real constants with a, b, c, d positive with the objective of normalization.
http://purl.obolibrary.org/obo/OBI_0200110	s transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		An s transformation is a data transformation obtained by applying the function S described in what follows to a (one dimensional) real number input. S(x)=T*exp(w-m)*(exp(x-w)-(p^2)*exp((w-x)/p)+p^2-1) if x>=w, S(x)=-S(w-x) otherwise; where exp denotes an exponential_transformations, 'p^' denotes the exponential transformation with base p; T, w, m, p are real constants with T, m, and p positive and w non-negative, and where w and p are related by w=2p*ln(p)(p+1) with the objective of normalization.
http://purl.obolibrary.org/obo/OBI_0200113	similarity calculation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A similarity calculation is a data transformation that attaches to each pair of objects in the input a number that is meant to reflect how 'close' or 'similar' those objects are.
http://purl.obolibrary.org/obo/OBI_0200114	euclidean distance calculation	http://purl.obolibrary.org/obo/OBI_0200113	similarity calculation		An euclidean distance calculation is a similarity calculation that attaches to each pair of real number vectors of the same dimension n the square root of the sum of the square differences between corresponding components. The smaller this number, the more similar the two vectors are considered.
http://purl.obolibrary.org/obo/OBI_0200115	pearson correlation coefficient calculation	http://purl.obolibrary.org/obo/OBI_0200113	similarity calculation		A pearson correlation coefficient calculation is a similarity calculation which attaches to each pair of random variables X and Y the ratio of their covariance by the product of their standard deviations. Given a series of n measurements of X and Y written as x_i and y_i where i = 1, 2, ..., n, then their Pearson correlation coefficient refers to the "sample correlation coefficient" and is written as the sum over i of the ratios (x_i-xbar)*(y_i-ybar)/((n-1)*s_x*s_y) where xbar and ybar are the sample means of X and Y , s_x and s_y are the sample standard deviations of X and Y. The closer the pearson correlation coefficient is to 1, the more similar the inputs are considered.
http://purl.obolibrary.org/obo/OBI_0200116	loess fitting	http://purl.obolibrary.org/obo/OBI_0200072	curve fitting data transformation		A loess fitting is a curve fitting obtained by localized regression. The latter refers to fitting a polynomial (straight line, quadratic, cubic, etc) to data values within a window covering a fraction of the total number of observations. As the window slides along the axis, a new polynomial is fit to the observations falling within the window. This continues until all points are fit with a local polynomial. The results are then smoothed together to form a curve. The smoothness of loess fits is controlled by a smoothing parameter (often denoted as alpha, usually between 1/4 and 1) and the degree of the polynomial that is fitted by the method (usually denoted by lambda).
http://purl.obolibrary.org/obo/OBI_0200117	mode calculation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A mode calculation is a descriptive statistics calculation in which the mode is calculated which is the most common value in a data set. It is most often used as a measure of center for discrete data.
http://purl.obolibrary.org/obo/OBI_0200118	quantile calculation	http://purl.obolibrary.org/obo/OBI_0200184	descriptive statistical calculation data transformation		A quantile calculation is a descriptive statistics calculation in which the kth quantile is the data value for which an approximate k fraction of the data is less than or equal to that value.  See http://www.stat.wvu.edu/SRS/Modules/Quantiles/quantiles.html for details.
http://purl.obolibrary.org/obo/OBI_0200119	median calculation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A median calculation is a  descriptive statistics calculation in which the midpoint of the data set (the 0.5 quantile) is calculated.  First, the observations are sorted in increasing order.  For an odd number of observations, the median is the middle value of the sorted data.  For an even number of observations, the median is the average of the two middle values.
http://purl.obolibrary.org/obo/OBI_0200120	variance calculation	http://purl.obolibrary.org/obo/OBI_0200086	spread calculation data transformation		A variance calculation is a descriptive statistics calculation in which the variance is defined as the average squared distance of each observation in the data set to the mean of the data set.  It is also known as the second central moment.
http://purl.obolibrary.org/obo/OBI_0200121	standard deviation calculation	http://purl.obolibrary.org/obo/OBI_0200086	spread calculation data transformation		A standard deviation calculation is a descriptive statistics calculation defined as the square root of the variance.  Also thought of as the average distance of each value to the mean.
http://purl.obolibrary.org/obo/OBI_0200122	interquartile-range calculation	http://purl.obolibrary.org/obo/OBI_0200086	spread calculation data transformation		The interquartile range is a descriptive statistics calculation defined as the difference between the 0.75 quantile and the 0.25 quantile for a set of data.
http://purl.obolibrary.org/obo/OBI_0200123	skewness calculation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A skewness calculation is a descriptive statistics calculation defined as a parameter that describes how much a distribution (or a data set) varies from a bell-shaped curve.  See http://www.riskglossary.com/link/skewness.htm for details.  It is also known as the third central moment
http://purl.obolibrary.org/obo/OBI_0200124	kurtosis calculation	http://purl.obolibrary.org/obo/OBI_0200086	spread calculation data transformation		A kurtosis calculation is a descriptive statistics calculation defined as a parameter that measures how large or small the tails of a distribution are relative to the mean.  For details, see http://davidmlane.com/hyperstat/A53638.html
http://purl.obolibrary.org/obo/OBI_0200126	network graph construction	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		A network analysis in which an input data set describing objects and relationships between objects is transformed into an output representation of these objects as nodes and the relationships as edges of a network graph.
http://purl.obolibrary.org/obo/OBI_0200127	weighted network graph construction	http://purl.obolibrary.org/obo/OBI_0200126	network graph construction		A network graph construction in which an input data set describing objects and quantitative relationships between objects is transformed into and output representation of these objects as nodes and the quantitative relationships as weighted edges of a network graph.
http://purl.obolibrary.org/obo/OBI_0200128	directed network graph construction	http://purl.obolibrary.org/obo/OBI_0200126	network graph construction		A network graph construction in which an input data set describing objects and directional relationships between objects is transformed into and output representation of these objects as nodes and the directional relationships as directed edges of a network graph.
http://purl.obolibrary.org/obo/OBI_0200129	node quality calculation	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		A network analysis in which an input data set describing node objects and edge relationships between node objects is used to determine the output quality of one of the node objects in the network.
http://purl.obolibrary.org/obo/OBI_0200130	node degree calculation	http://purl.obolibrary.org/obo/OBI_0200129	node quality calculation		A node quality calculation in which an input data set describing object nodes and relationship edges between object nodes is used to enumerate the number of unique relationships of an individual object node.
http://purl.obolibrary.org/obo/OBI_0200131	quantitative node degree calculation	http://purl.obolibrary.org/obo/OBI_0200129	node quality calculation		A node quality calculation in which an input data set describing object nodes and quantitative relationship edges between object nodes is used to sum all of the quantitative relationships of an individual object node.
http://purl.obolibrary.org/obo/OBI_0200132	node in-degree calculation	http://purl.obolibrary.org/obo/OBI_0200129	node quality calculation		A node quality calculation in which an input data set describing object nodes and directional relationship edges between object nodes is used to enumerate the number of unique relationships pointing into an individual object node.
http://purl.obolibrary.org/obo/OBI_0200133	node out-degree calculation	http://purl.obolibrary.org/obo/OBI_0200129	node quality calculation		A node quality calculation in which an input data set describing object nodes and directional relationship edges between object nodes is used to enumerate the number of unique relationships pointing out of an individual object node.
http://purl.obolibrary.org/obo/OBI_0200134	node shortest path identification	http://purl.obolibrary.org/obo/OBI_0200129	node quality calculation		A node quality calculation in which a path describing the shortest path needed to transverse through connected nodes and edges to arrive at a specific target node in the network.
http://purl.obolibrary.org/obo/OBI_0200135	edge quality calculation	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		A network analysis in which an input data set describing node objects and edge relationships between node objects is used to determine the output quality of one of the edge relationships in the network.
http://purl.obolibrary.org/obo/OBI_0200136	edge betweenness calculation	http://purl.obolibrary.org/obo/OBI_0200135	edge quality calculation		An edge quality calculation in which the input is a data sets of shortest paths between all pairs of node in the network and the output is the sum of all shortest paths that traverse the specific edge.
http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		A network analysis in which an input data set describing node objects and edge relationships between node objects is used to determine the output quality of a subgraph partition of the network.
http://purl.obolibrary.org/obo/OBI_0200138	subgraph degree calculation	http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation		A network subgraph quality calculation in which an input data set describing subgraphs and relationship edges between subgraphs and other network objects is used to enumerate the number of unique relationships of an individual subgraph.
http://purl.obolibrary.org/obo/OBI_0200139	quantitative subgraph degree calculation	http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation		A network subgraph quality calculation in which an input data set describing subgraphs and quantitative relationship edges between subgraphs and other network objects is used to sum the quantitative relationships of an individual subgraph.
http://purl.obolibrary.org/obo/OBI_0200140	mathematical feature	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		feature is a (parent_class) that describes a characteristic, trait or quality of a data transformation
http://purl.obolibrary.org/obo/OBI_0200143	subgraph in-degree calculation	http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation		A network subgraph quality calculation in which an input data set describing subgraphs and directional relationship edges between subgraphs and other network objects is used to enumerate the number of unique relationships pointing into an individual subgraph.
http://purl.obolibrary.org/obo/OBI_0200144	subgraph out-degree calculation	http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation		A network subgraph quality calculation in which an input data set describing subgraphs and relationship edges between subgraphs and other network objects is used to enumerate the number of unique relationships pointing out of an individual subgraph.
http://purl.obolibrary.org/obo/OBI_0200145	intra subgraph connectivity calculation	http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation		A network subgraph quality calculation in which an input data set describing internal nodes, edges and node degrees is used to determine the average node degree within the subgraph.
http://purl.obolibrary.org/obo/OBI_0200146	subgraph modularity calculation	http://purl.obolibrary.org/obo/OBI_0200137	network subgraph quality calculation		A network subgraph quality calculation in which an input data set of subgraph in-degree and out-degree qualities is used to calculate the ratio of indegree to outdegree as a measure of modularity.
http://purl.obolibrary.org/obo/OBI_0200147	network graph quality calculation	http://purl.obolibrary.org/obo/OBI_0200080	network analysis		A network analysis in which an input data set describing node objects and edge relationships between node objects is used to determine the output quality of the network as a whole.
http://purl.obolibrary.org/obo/OBI_0200150	MA transformation	http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation		An MA transformation is a data transformation which takes as input a collection of data points (g_1, r_1), (g_2, r_2), ..., (g_n, r_n)  with the r_i and g_i positive real numbers, and whose output is the collection of data points (A_1, M_1), (A_2, M_2), ..., (A_n, M_n) where, for each i, A_i=(log(g_i)+log(r_i))/2 and M_i=log(r_i)-log(g_i). Here log denotes a logarithmic transformation.
http://purl.obolibrary.org/obo/OBI_0200151	exponential base	http://purl.obolibrary.org/obo/OBI_0200140	mathematical feature		The exponential base is a feature of an exponential function which is defined in http://en.wikipedia.org/wiki/Exponential_function. Its value can be any positive real number (typically different from 1).
http://purl.obolibrary.org/obo/OBI_0200152	polynomial degree	http://purl.obolibrary.org/obo/OBI_0200140	mathematical feature		The polynomial degree is a feature of a polynomial function defined as the highest power of the polynomial's terms, where the terms of a polynomial are the individual summands with the coefficients omitted.
http://purl.obolibrary.org/obo/OBI_0200153	number of variables	http://purl.obolibrary.org/obo/OBI_0200140	mathematical feature		The number of variables is a feature of any function (including polynomial functions) with domain contained in an n-dimensional vector space and is defined as n, the dimension of such space.
http://purl.obolibrary.org/obo/OBI_0200156	data partitioning	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		Data partitioning is a data transformation with the objective of partitioning or separating input data into output subsets.
http://purl.obolibrary.org/obo/OBI_0200157	data vector reduction objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		Data vector reduction is a data transformation objective in which k m-dimensional input vectors are reduced to j m-dimensional output vectors, where j is smaller than k.
http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		An objective specification to transformation input data into output data
http://purl.obolibrary.org/obo/OBI_0200167	data normalization objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A normalization objective is a data transformation objective where the aim is to remove
systematic sources of variation to put the data on equal footing in order
to create a common base for comparisons.
http://purl.obolibrary.org/obo/OBI_0200168	correction objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A correction objective is a data transformation objective where the aim is to correct for error, noise or other impairments to the input of the data transformation or derived from the data transformation itself
http://purl.obolibrary.org/obo/OBI_0200169	normalization data transformation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A normalization data transformation is a data transformation that has objective normalization.
http://purl.obolibrary.org/obo/OBI_0200170	averaging data transformation	http://purl.obolibrary.org/obo/OBI_0200184	descriptive statistical calculation data transformation		An averaging data transformation is a data transformation that has objective averaging.
http://purl.obolibrary.org/obo/OBI_0200171	partitioning data transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A partitioning data transformation is a data transformation that has objective partitioning.
http://purl.obolibrary.org/obo/OBI_0200172	partitioning objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A partitioning objective is a data transformation objective where the aim is to generate a collection of disjoint non-empty subsets whose union equals a non-empty input set.
http://purl.obolibrary.org/obo/OBI_0200173	background correction objective	http://purl.obolibrary.org/obo/OBI_0200168	correction objective		A background correction objective is a data transformation objective where the aim is to remove irrelevant contributions from the measured signal, e.g. those due to instrument noise or sample preparation.
http://purl.obolibrary.org/obo/OBI_0200174	curve fitting objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A curve fitting objective is a data transformation objective in which the aim is to find a curve which matches a series of data points and possibly other constraints.
http://purl.obolibrary.org/obo/OBI_0200176	Fisher's exact test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		Fisher's exact test is a data transformation used to determine if there are nonrandom associations between two Fisher's exact test is a statistical significance test used in the analysis of contingency tables where sample sizes are small where the significance of the deviation from a null hypothesis can be calculated exactly, rather than relying on an approximation that becomes exact in the limit as the sample size grows to infinity, as with many statistical tests.
http://purl.obolibrary.org/obo/OBI_0200177	center calculation objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A center calculation objective is a data transformation objective where the aim is to calculate the center of an input data set.
http://purl.obolibrary.org/obo/OBI_0200180	spread calculation objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		is a data transformation objective whereby the aim is to the calculate the spread of a dataset, spread is a descriptive statistic which describes the variability of values in a data set.
http://purl.obolibrary.org/obo/OBI_0200181	center calculation data transformation	http://purl.obolibrary.org/obo/OBI_0200184	descriptive statistical calculation data transformation		A center calculation data transformation is a data transformation that has objective of center calculation.
http://purl.obolibrary.org/obo/OBI_0200182	data vector reduction data transformation	http://purl.obolibrary.org/obo/OBI_0000707	decision tree building data transformation		A data vector reduction is a data transformation that has objective data vector reduction and that consists of reducing the input vectors k to a smaller number of output vectors j, where j<k.
http://purl.obolibrary.org/obo/OBI_0200183	scaling objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		is a data transformation objective where all, or some of a data set is adjusted by some data transformation according to some scale, for example a user defined minimum or maximum
http://purl.obolibrary.org/obo/OBI_0200184	descriptive statistical calculation data transformation	http://purl.obolibrary.org/obo/OBCS_0000001	statistical data analysis		A descriptive statistical calculation data transformation is a data transformation that has objective descriptive statistical calculation and which concerns any calculation intended to describe a feature of a data set, for example, its center or its variability.
http://purl.obolibrary.org/obo/OBI_0200185	scaling data transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A scaling data transformation is a data transformation that has objective scaling.
http://purl.obolibrary.org/obo/OBI_0200186	error correction objective	http://purl.obolibrary.org/obo/OBI_0200168	correction objective		An error correction objective is a data transformation objective where the aim is to remove (correct for) erroneous contributions arising from the input data, or the transformation itself.
http://purl.obolibrary.org/obo/OBI_0200187	sequence analysis data transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A sequence analysis data transformation is a data transformation that has objective sequence analysis and has the aim of analysing ordered biological data for sequential patterns.
http://purl.obolibrary.org/obo/OBI_0200190	clustered data visualization	http://purl.obolibrary.org/obo/OBI_0200111	data visualization		A data visualization which has input of a clustered data set and produces an output of a report graph which is capable of rendering data of this type.
http://purl.obolibrary.org/obo/OBI_0200191	gene list visualization	http://purl.obolibrary.org/obo/OBI_0200111	data visualization		Adata visualization which has input of a gene list and produces an output of a report graph which is capable of rendering data of this type.
http://purl.obolibrary.org/obo/OBI_0200192	classified data visualization	http://purl.obolibrary.org/obo/OBI_0200111	data visualization		A data visualization which has input of a classified data set and produces an output of a report graph which is capable of rendering data of this type.
http://purl.obolibrary.org/obo/OBI_0200193	background corrected data visualization	http://purl.obolibrary.org/obo/OBI_0200111	data visualization		A data visualization which has input of a background corrected data set and produces an output of a report graph which is capable of rendering data of this type.
http://purl.obolibrary.org/obo/OBI_0200194	survival analysis data transformation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation which has the objective of performing survival analysis.
http://purl.obolibrary.org/obo/OBI_0200196	correlation study objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A data transformation objective in which correlation is obtained (often measured as a correlation coefficient, ρ) which indicates the strength and direction of a relationship between two random variables.
http://purl.obolibrary.org/obo/OBI_0200197	spectrum analysis objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		is a data transformation objective where the aim is to analyse some aspect of spectral data by some data transformation process.
http://purl.obolibrary.org/obo/OBI_0200199	gas chromatography mass spectrometry	http://purl.obolibrary.org/obo/OBI_0200085	mass spectrometry analysis		Gas chromatography mass spectrometry is a data transformation combining mass spectrometry and  
gas chromatography for the qualitative as well as quantitative  
determinations of compounds.
http://purl.obolibrary.org/obo/OBI_0200200	chi square test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		The chi-square test is a data transformation with the objective of statistical hypothesis testing, in which the sampling distribution of the test statistic is a chi-square distribution when the null hypothesis is true, or any in which this is asymptotically true, meaning that the sampling distribution (if the null hypothesis is true) can be made to approximate a chi-square distribution as closely as desired by making the sample size large enough.
http://purl.obolibrary.org/obo/OBI_0200201	ANOVA	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		A statistical hypothesis test in which the means of several groups are all equal.
http://purl.obolibrary.org/obo/OBI_0300310	sequential design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		Any design in which the decision as to whether to enroll the next patient, pair of patients, or block of patients is determined by whether the cumulative treatment difference for all previous patients is within specified limits.  Enrollment is continued if the difference does not exceed the limits.  It is terminated if it does
http://purl.obolibrary.org/obo/OBI_0300311	observation design	http://purl.obolibrary.org/obo/OBI_0500000	study design		observation design is a study design in which subjects are monitored in the absence of any active intervention by experimentalists.
http://purl.obolibrary.org/obo/OBI_0302859	genetically modified organism	http://purl.obolibrary.org/obo/OBI_0100026	organism		an organism that is the output of a genetic transformation process
http://purl.obolibrary.org/obo/OBI_0302867	predicted data item	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that was generated on the basis of a calculation or logical reasoning
http://purl.obolibrary.org/obo/OBI_0302868	mean-centered data	http://purl.obolibrary.org/obo/OBI_0000451	normalized data set		a data item which has been processed by a mean centering data transformation where each output value is produced by subtracting the mean from the inout value
http://purl.obolibrary.org/obo/OBI_0302884	extraction	http://purl.obolibrary.org/obo/OBI_0600014	material component separation		A material separation in which a desired component of an input material is separated from the remainder
http://purl.obolibrary.org/obo/OBI_0302900	group randomization	http://purl.obolibrary.org/obo/OBI_0600015	group assignment		A group assignment which relies on chance to assign materials to a group of materials in order to avoid bias in experimental set up.
http://purl.obolibrary.org/obo/OBI_0302910	prediction	http://purl.obolibrary.org/obo/OBI_0000011	planned process		a process by which an  event or an entity is described before it actually happens or is being discovered and identified.
http://purl.obolibrary.org/obo/OBI_0400107	computer	http://purl.obolibrary.org/obo/OBI_0000968	device		A computer is an instrument which manipulates (stores, retrieves, and processes) data according to a list of instructions.
http://purl.obolibrary.org/obo/OBI_0500002	repeated measure design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		a study design which use the same individuals and exposure them to a set of conditions. The effect of order and practice can be confounding factor in such designs
http://purl.obolibrary.org/obo/OBI_0500003	cross over design	http://purl.obolibrary.org/obo/OBI_0500002	repeated measure design		a repeated measure design which ensures that experimental units receive, in sequence, the treatment (or the control), and then, after a specified time interval (aka *wash-out periods*), switch to the control (or treatment). In this design, subjects (patients in human context) serve as their own controls, and randomization may be used to determine the ordering which a subject receives the treatment and control
http://purl.obolibrary.org/obo/OBI_0500004	n-to-1 design	http://purl.obolibrary.org/obo/OBI_0500003	cross over design		N-of-1 design is a cross-over design in which the same patient is repeatedly randomised to receive either the experimental treatment or its control (Senn, 1993).
http://purl.obolibrary.org/obo/OBI_0500007	randomized complete block design	http://purl.obolibrary.org/obo/OBI_0000115	intervention design		A randomized complete block design is_a study design which assigns randomly treatments to block. The number of units per block equals the number of treatment so each block receives each treatment exactly once (hence the qualifier 'complete'). The design was originally devised from field trials used in agronomy and agriculture. The analysis assumes that there is no interaction between block and treatment. The method was then used in other settings So The randomised complete block design is a design in which the subjects are matched according to a variable which the experimenter wishes to control. The subjects are put into groups (blocks) of the same size as the number of treatments. The members of each block are then randomly assigned to different treatment groups.
http://purl.obolibrary.org/obo/OBI_0500011	latin square design	http://purl.obolibrary.org/obo/OBI_0500007	randomized complete block design		Latin square design is_a study design which allows in its simpler form controlling 2 levels of nuisance variables (also known as blocking variables).he 2 nuisance factors are divided into a tabular grid with the property that each row and each column receive each treatment exactly once.
http://purl.obolibrary.org/obo/OBI_0500012	graeco latin square design	http://purl.obolibrary.org/obo/OBI_0500007	randomized complete block design		Greco-Latin square design is a study design which relates to Latin square design
http://purl.obolibrary.org/obo/OBI_0500013	hyper graeco latin square design	http://purl.obolibrary.org/obo/OBI_0500007	randomized complete block design		PRS to do
http://purl.obolibrary.org/obo/OBI_0500018	replicate design	http://purl.obolibrary.org/obo/OBI_0500000	study design		A replicate experimental design type is where a series of replicates are performed to evaluate reproducibility or as a pilot study to determine the appropriate number of replicates for a subsequent experiments.
http://purl.obolibrary.org/obo/OBI_0500020	time series design	http://purl.obolibrary.org/obo/OBI_0500000	study design		Groups of assays that are related as part of a time series.
http://purl.obolibrary.org/obo/OBI_0600005	collecting specimen from organism	http://purl.obolibrary.org/obo/OBI_0000659	specimen collection process		a process with the objective to obtain a material entity that was part of an organism for potential future use in an investigation
http://purl.obolibrary.org/obo/OBI_0600014	material component separation	http://purl.obolibrary.org/obo/OBI_0000094	material processing		a material processing in which components of an input material become segregated in space
http://purl.obolibrary.org/obo/OBI_0600024	maintaining cell culture	http://purl.obolibrary.org/obo/OBI_0000838	material maintenance		A planned process with the objective to keep cells alive in a defined environment outside of an organism.
http://purl.obolibrary.org/obo/OBI_0600036	establishing cell culture	http://purl.obolibrary.org/obo/OBI_0000094	material processing		a process through which a new type of cell culture or cell line is created, either through the isolation and culture of one or more cells from a fresh source, or the deliberate experimental modification of an existing cell culture (e.g passaging a primary culture to become a secondary culture or line, or the immortalization or stable genetic modification of an existing culture or line).
http://purl.obolibrary.org/obo/OBI_0666667	nucleic acid extraction	http://purl.obolibrary.org/obo/OBI_0302884	extraction		a material separation to recover the nucleic acid fraction of an input material
http://purl.obolibrary.org/obo/OGMS_0000063	disease course	http://purl.obolibrary.org/obo/BFO_0000015	process		The totality of all processes through which a given disease instance is realized.
http://purl.obolibrary.org/obo/PATO_0000011	age	http://purl.obolibrary.org/obo/PATO_0001018	physical quality		A time quality inhering in a bearer by virtue of how long the bearer has existed.
http://purl.obolibrary.org/obo/PATO_0000122	length	http://purl.obolibrary.org/obo/PATO_0001241	physical object quality		A 1-D extent quality which is equal to the distance between two points.
http://purl.obolibrary.org/obo/PATO_0000125	mass	http://purl.obolibrary.org/obo/PATO_0001018	physical quality		A physical quality that inheres in a bearer by virtue of the proportion of the bearer's amount of matter.
http://purl.obolibrary.org/obo/PATO_0001421	alive	http://purl.obolibrary.org/obo/PATO_0000169	viability		A viability quality inhering in a bearer by virtue of the bearer's condition before death.
http://purl.obolibrary.org/obo/PATO_0001422	dead	http://purl.obolibrary.org/obo/PATO_0000169	viability		A viability quality inhering in a bearer by virtue of the cessation of the bearer's life.
http://purl.obolibrary.org/obo/PATO_0001995	organismal quality	http://purl.obolibrary.org/obo/PATO_0001241	physical object quality		A quality that inheres in an entire organism or part of an organism.
http://purl.obolibrary.org/obo/PATO_0002201	handedness	http://purl.obolibrary.org/obo/PATO_0001995	organismal quality		A behavioral quality inhering ina bearer by virtue of the bearer's unequal distribution of fine motor skill between its left and right hands or feet.
http://purl.obolibrary.org/obo/SO_0000001	region	http://purl.obolibrary.org/obo/BFO_0000031	generically dependent continuant		A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids.
http://purl.obolibrary.org/obo/SO_0000148	supercontig	http://purl.obolibrary.org/obo/SO_0000353	sequence_assembly		One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.
http://purl.obolibrary.org/obo/SO_0000149	contig	http://purl.obolibrary.org/obo/SO_0000353	sequence_assembly		A contiguous sequence derived from sequence assembly. Has no gaps, but may contain N's from unavailable bases.
http://purl.obolibrary.org/obo/SO_0000353	sequence_assembly	http://purl.obolibrary.org/obo/SO_0001248	assembly		A sequence of nucleotides that has been algorithmically derived from an alignment of two or more different sequences.
http://purl.obolibrary.org/obo/SO_0001248	assembly	http://purl.obolibrary.org/obo/SO_0001410	experimental_feature		A region of the genome of known length that is composed by ordering and aligning two or more different regions.
http://purl.obolibrary.org/obo/STATO_0000017	Wilk's lambda distribution	http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution		Wilks' lambda distribution (named for Samuel S. Wilks), is a probability distribution used in multivariate hypothesis testing, especially with regard to the likelihood-ratio test and Multivariate analysis of variance. It is a multivariate generalization of the univariate F-distribution, and generalizes the F-distribution in the same way that the Hotelling's T-squared distribution generalizes Student's t-distribution.
http://purl.obolibrary.org/obo/OBCS_0000001	statistical data analysis	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation that has input of mulitple data and report overall trend of the data.
http://purl.obolibrary.org/obo/OBCS_0000002	data collection	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process that gathers and measures information on variables of interest, in an established systematic fashion that enables one to answer stated research questions, test hypotheses, and evaluate outcomes. Data collection results in a collection of data.
http://purl.obolibrary.org/obo/OBCS_0000004	gamma distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution		A continuous probability distribution that is a two-parameter family of continuous probability distributions.
http://purl.obolibrary.org/obo/OBCS_0000009	point biserial correlation	http://purl.obolibrary.org/obo/OBCS_0000019	correlation statistical analysis		A special case of the Pearson product-moment correlation; calculated when either the independent variable or dependent variable is dichotomous while the other variable is non-dichotomous
http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An information content entity that refers to a distribution of a random variable that can be described using a mathematical formula.
http://purl.obolibrary.org/obo/OBCS_0000012	outlier	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that is numerically distant from the rest of the data; often indicative either measurement error or that the population has a high kurtosis.
http://purl.obolibrary.org/obo/OBCS_0000013	test statistic	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A statistic measure that is a function of the samples and considered as a numberical summary of a data-set that reduces the data to one value that can be used to perform a hypothesis test. It can be used to test a finding for statistical signifiance
http://purl.obolibrary.org/obo/OBCS_0000014	weighted data	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A derived data from inferential statistical analysis that is obtained by applying a weighting process to adjust the impact of cases for representing the population from which the data sample is drawn.
http://purl.obolibrary.org/obo/OBCS_0000015	central tendency	http://purl.obolibrary.org/obo/OBCS_0000219	derived data from descriptive statistical analysis		A data item that represents a typical value of a set of values. This term relates to the way in which quantitative data tend to cluster around some value.
http://purl.obolibrary.org/obo/OBCS_0000016	mode	http://purl.obolibrary.org/obo/OBI_0000674	center value		A data item that is the value that appears most frequent in a set of data. In a normal distribution the numerical value of the mode is the same as that of the mean and median.
http://purl.obolibrary.org/obo/OBCS_0000018	causal model	http://purl.obolibrary.org/obo/OBCS_0000035	statistical model		A statistical model that an abstract, quantitative model of the causal dependencies and other interrelationships among observed or hypothetical models; an ordered triple , where U is a set of exogenous variables whose values are determined by factors outside the model; V is a set of endogenous variables whose values are determined by factors within the model; and E is a set of structural equations that express the value of each endogenous variable as a function of the values of the other variables in U and V.
http://purl.obolibrary.org/obo/OBCS_0000019	correlation statistical analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A measure of the linear association between two variables that are measured on ordinal, interval or ratio scales
http://purl.obolibrary.org/obo/OBCS_0000021	Mendelian randomization	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis that uses measured variation in genes of known function to examine the causal effect of a modifiable exposure on disease in non-experimental studies.
http://purl.obolibrary.org/obo/OBCS_0000023	multivariate analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis that is used to analyze data that arises from more than one variable
http://purl.obolibrary.org/obo/OBCS_0000024	power calculation	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation that is used to calculate the power of a statistical analysis.
http://purl.obolibrary.org/obo/OBCS_0000025	univariate analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis that has only one independent variable
http://purl.obolibrary.org/obo/OBCS_0000026	statistical association	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis that analyze the relationship between two measured quantities that renders them statistically dependent
http://purl.obolibrary.org/obo/OBCS_0000027	cochran-armitage test	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A data transformation used in categorical data analysis when the aim is to assess for the presence of an association between a variable with two categories and a variable with k categories.
http://purl.obolibrary.org/obo/OBCS_0000029	covariation	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A measure of the extent to which two variables are associated; the extent to which two random variables vary together
http://purl.obolibrary.org/obo/OBCS_0000030	goodness of fit	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis used to analyze how well a statistical model fits a set of observations; measures of goodness of fit typically summarize the discrepancy between observed values and the values expected under the model in question.
http://purl.obolibrary.org/obo/OBCS_0000032	levene's test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		A data transformation that is specifically an inferential statistic to assess the equality of variances in different sample; tests the null hypothesis that the population variances are equal (called homogeneity of variance or homoscedasticity).
http://purl.obolibrary.org/obo/OBCS_0000033	loglinear analysis	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		A data transformation used for both hypothesis testing and model building to examine the relationship between more than two categorical variables; uses a likelihood ratio statistic that has an approximate chi-square distribution when the sample size is large.
http://purl.obolibrary.org/obo/OBCS_0000034	mcnemar's test	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		A normal approximation used on nominal data; applied to 2x2 contingency tables to determine whether the row and column marginal frequencies are equal ("marginal homogeneity").
http://purl.obolibrary.org/obo/OBCS_0000042	dummy variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable		A statistical variable with only two categories that reflect only part of the information available in a more comprehensive variable
http://purl.obolibrary.org/obo/OBCS_0000044	binomial distribution	http://purl.obolibrary.org/obo/OBCS_0000067	discrete probability distribution		A discrete probability distribution that has the number of successes in a sequence of n independent yes/no experiments, each of which yields success with probability p. Such a success/failure experiment is also called a Bernoulli experiment or Bernoulli trial.
http://purl.obolibrary.org/obo/OBCS_0000045	Poisson distribution	http://purl.obolibrary.org/obo/OBCS_0000067	discrete probability distribution		A discrete probability distribution that expresses the probability of a given number of events occurring in a fixed interval of time and/or space if these events occur with a known average rate and independently of the time since the last event. The Poisson distribution can also be used for the number of events in other specified intervals such as distance, area or volume.
http://purl.obolibrary.org/obo/OBCS_0000046	negative likelihood ratio	http://purl.obolibrary.org/obo/OBCS_0000118	likelihood ratio		A likelihood ratio that is calculated by dividing 1 minus sensitivity by specificity ((1-sensitivity)/specificity).
http://purl.obolibrary.org/obo/OBCS_0000047	positive likelihood ratio	http://purl.obolibrary.org/obo/OBCS_0000118	likelihood ratio		A likelihood ratio that is calculated by dividing sensitivity by 1 minus specificity (sensitivity/(1-specificity)).
http://purl.obolibrary.org/obo/OBCS_0000048	absolute risk	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item of an observed or calculated probability of occurrence of an event, X, in a population related to exposure to a specific hazard, infection, trauma; the number of persons suffering from a disease when the exposed population is known with certainty.
http://purl.obolibrary.org/obo/OBCS_0000049	accuracy	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that refers to the number of true positives and true negatives divided by the total number of observations.
http://purl.obolibrary.org/obo/OBCS_0000051	normal distribution probability density function	http://purl.obolibrary.org/obo/OBCS_0000116	probability density function		A probability density function that is for normal distribution probability
http://purl.obolibrary.org/obo/OBCS_0000053	test validity	http://purl.obolibrary.org/obo/OBCS_0000060	validity		A validity that refers to the degree to which evidence and theory support the interpretations of test scores (as entailed by proposed uses of tests).
http://purl.obolibrary.org/obo/OBCS_0000054	odds ratio	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that refers to the odds that an individual with a specific condition has been exposed to a risk factor divided by the odds that a control has been exposed. The odds ratio is used in case-control studies. The odds ratio provides a reasonable estimate of the relative risk for uncommon conditions.
http://purl.obolibrary.org/obo/OBCS_0000056	relative risk	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that equals the incidence in exposed individuals divided by the incidence in unexposed individuals. The relative risk can be calculated from studies in which the proportion of patients exposed and unexposed to a risk is known, such as a cohort study.
http://purl.obolibrary.org/obo/OBCS_0000057	reliability	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that refers to the extent to which repeated measurements of a relatively stable phenomenon fall closely to each other.
http://purl.obolibrary.org/obo/OBCS_0000060	validity	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that refers to the extent to which a concept conclusion or measurement is well-founded and corresponds accurately to the real world.
http://purl.obolibrary.org/obo/OBCS_0000061	polynomial regression	http://purl.obolibrary.org/obo/OBI_0200103	multiple linear regression analysis		A special case of multiple linear regression in which the relationship between the independent variable x and the dependent variable y is modeled as an nth order polynomial
http://purl.obolibrary.org/obo/OBCS_0000063	random selection	http://purl.obolibrary.org/obo/OBCS_0000132	data collection by sampling		A data collection by sampling process that uses some form of random selection, that is, one that will ensure that all units in the population have an equal probability or chance of being selected.
http://purl.obolibrary.org/obo/OBCS_0000064	period prevalence rate	http://purl.obolibrary.org/obo/OBCS_0000055	prevalence rate		A prevalence rate that occurs at a specific period of time.
http://purl.obolibrary.org/obo/OBCS_0000065	point prevalence rate	http://purl.obolibrary.org/obo/OBCS_0000055	prevalence rate		A prevalence rate that occurs at a specific point of time.
http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution	http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution		A probability distribution that is associated with continuous variables and has a probability density function.
http://purl.obolibrary.org/obo/OBCS_0000067	discrete probability distribution	http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution		A probability distribution that is associated with discrete variables and is characterized by a probability mass function.
http://purl.obolibrary.org/obo/OBCS_0000068	frequency distribution	http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution		A tabular summary of a set of data showing the number of items in each of several non-overlapping classes or groupings
http://purl.obolibrary.org/obo/OBCS_0000069	cohen's kappa coefficient	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A statistical measure of inter-rater agreement or inter-annotator agreement for qualitative (categorical) items.
http://purl.obolibrary.org/obo/OBCS_0000070	confidence interval	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that refers to an interval give values within which there is a high probability (95 percent by convention) that the true population value can be found. The calculation of a confidence interval considers the standard deviation of the data and the number of observations. Thus, a confidence interval narrows as the number of observations increases, or its variance (dispersion) decreases.
http://purl.obolibrary.org/obo/OBCS_0000071	credible interval	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that is used  in Bayesian analysis to describe the range in which a posterior probability estimate is likely to reside.
http://purl.obolibrary.org/obo/OBCS_0000072	interquartile range	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that refers to the upper and lower values defining the central 50 percent of observations. The boundaries are equal to the 25th and 75th percentiles. The interquartile range can be depicted in a box and whiskers plot.
http://purl.obolibrary.org/obo/OBCS_0000073	percentile	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that equals the percentage of a distribution that is below a specific value. As an example, a child is in 90th percentile for weight if only 10 percent of children the same age weigh more than she does.
http://purl.obolibrary.org/obo/OBCS_0000074	power	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that refers to the ability of a study to detect a true difference. Negative findings may reflect that the study was underpowered to detect a difference.
http://purl.obolibrary.org/obo/OBCS_0000075	random error	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A component of experimental error that occurs due to natural variation in the process.
http://purl.obolibrary.org/obo/OBCS_0000076	range	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that equals the difference between the largest and smallest observation.
http://purl.obolibrary.org/obo/OBCS_0000077	standard deviation	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that measures the variability of data around the mean.
http://purl.obolibrary.org/obo/OBCS_0000080	bias	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that is a general statistical term meaning a systematic (not random) deviation from the true value
http://purl.obolibrary.org/obo/OBCS_0000083	expected value	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that represents theoretical average value of a statistic over an infinite number of samples from the same population;  the weights correspond to the probabilities in the case of a discrete random variable or densities in the case of a continuous random variable.
http://purl.obolibrary.org/obo/OBCS_0000085	standardized coefficient	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that has been standardized so that they have variances of 1.0; produces standardized regression coefficients (betas)
http://purl.obolibrary.org/obo/OBCS_0000087	nonlinear regression	http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method		A form of regression analysis in which observational data are modeled by a function which is a nonlinear combination of the model parameters and depends on one or more independent variables
http://purl.obolibrary.org/obo/OBCS_0000090	interval scale	http://purl.obolibrary.org/obo/OBCS_0000011	measurement scale		A measurement scale consisting of equal-sized units; the distance between any two positions is of known size.
http://purl.obolibrary.org/obo/OBCS_0000091	nominal scale	http://purl.obolibrary.org/obo/OBCS_0000011	measurement scale		A measurement scale that placing of data into categories, without any order or structure (see related OBI term of categorical measurement datum).
http://purl.obolibrary.org/obo/OBCS_0000092	ordinal scale	http://purl.obolibrary.org/obo/OBCS_0000011	measurement scale		A measurement scale that rankings on which data can be sorted however the size or magnitude of differences between any data points in a class is unknown, just that one ranking is greater than the other
http://purl.obolibrary.org/obo/OBCS_0000093	ratio scale	http://purl.obolibrary.org/obo/OBCS_0000011	measurement scale		A measurement scale  that is similar to an interval scale, i.e. a magnitude of a continuous quantity and a unit magnitude of the same kind; the distinguishing feature of a ratio scale is a meaningful zero value that means the absence of whatever is measured.
http://purl.obolibrary.org/obo/OBCS_0000094	disease test sensitivity	http://purl.obolibrary.org/obo/OBCS_0000058	sensitivity		A sensitivity that refers to the number of patients with a positive test who have a disease divided by all patients who have the disease. A test with high sensitivity will not miss many patients who have the disease (i.e., few false negative results).
http://purl.obolibrary.org/obo/OBCS_0000095	disease test specificity	http://purl.obolibrary.org/obo/OBCS_0000059	specificity		A specificity that refers to the number of patients who have a negative test and do not have the disease divided by the number of patients who do not have the disease. A test with high specificity will infrequently identify patients as having a disease when they do not (i.e., few false positive results).
http://purl.obolibrary.org/obo/OBCS_0000096	fixed effect	http://purl.obolibrary.org/obo/OBCS_0000037	statistical effect		A statistical effect that is associated with an input variable that has a limited number of levels or in which only a limited number of levels are of interest to the experimenter.
http://purl.obolibrary.org/obo/OBCS_0000098	random effect	http://purl.obolibrary.org/obo/OBCS_0000037	statistical effect		A statistical effect that is associated with input variables chosen at random from a population having a large or infinite number of possible values.
http://purl.obolibrary.org/obo/OBCS_0000099	lack of fit error	http://purl.obolibrary.org/obo/OBCS_0000082	statistical error		A statistical error that occurs when the analysis omits one or more important terms or factors from the model.
http://purl.obolibrary.org/obo/OBCS_0000102	F test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		A statistical hypothesis test in which the test statistic has an F-distribution under the null hypothesis
http://purl.obolibrary.org/obo/OBCS_0000104	balanced design	http://purl.obolibrary.org/obo/OBI_0500000	study design		An experimental design where all cells (i.e. treatment combinations) have the same number of observation
http://purl.obolibrary.org/obo/OBCS_0000105	case-control study design	http://purl.obolibrary.org/obo/OBI_0500000	study design		A study design that starts with the outcome of interest and works backward to the exposure. For instance, patients with a disease are identified and compared with controls for exposure to a risk factor.
http://purl.obolibrary.org/obo/OBCS_0000106	cohort study design	http://purl.obolibrary.org/obo/OBI_0500000	study design		A study design that starts with an exposure and moves forward to the outcome of interest, even if the data are collected retrospectively. As an example, a group of patients who have variable exposure to a risk factor of interest can be followed over time for an outcome.
http://purl.obolibrary.org/obo/OBCS_0000107	randomized controlled trial design	http://purl.obolibrary.org/obo/OBI_0500000	study design		A study design in which patients are randomly assigned to two or more interventions.
http://purl.obolibrary.org/obo/OBCS_0000108	complex sample design	http://purl.obolibrary.org/obo/OBCS_0000062	data sampling design		A data sampling design that is designed to generate complex samples where sample members do not have equal probability of being selected.
http://purl.obolibrary.org/obo/OBCS_0000109	kappa statistic	http://purl.obolibrary.org/obo/OBCS_0000013	test statistic		A statistic test for several similar measures of agreement used with categorical data; typically used in assessing the degree to which two or more raters, examining the same data, agree on assigning data to categories
http://purl.obolibrary.org/obo/OBCS_0000110	bartlett's test	http://purl.obolibrary.org/obo/OBCS_0000013	test statistic		A test statistic of whether k samples are from populations with equal variances.
http://purl.obolibrary.org/obo/OBCS_0000113	weighted kappa	http://purl.obolibrary.org/obo/OBCS_0000014	weighted data		A weighted data that measures the agreement for categorical data; a generalization of the Kappa statistics to situations in which the categories are not equal in some respect so weighted by an objective or subjective function
http://purl.obolibrary.org/obo/OBCS_0000114	median	http://purl.obolibrary.org/obo/OBI_0000674	center value		A center value that separates the higher half from the lower half of the data sample, population, or probability distribution
http://purl.obolibrary.org/obo/OBCS_0000115	mixed model	http://purl.obolibrary.org/obo/OBCS_0000035	statistical model		A statistical model containing both fixed effects and random effects, that is mixed effects;
http://purl.obolibrary.org/obo/OBCS_0000117	rank order	http://purl.obolibrary.org/obo/OBCS_0000220	derived data from inferential statistical analysis		A data item that represents an arrangement according to a rank, i.e., the position of a particular case relative to other cases on a defined scale.
http://purl.obolibrary.org/obo/OBCS_0000118	likelihood ratio	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		A quantitative confidence value that expresses how many times more likely the data are under one model than the other. 
http://purl.obolibrary.org/obo/OBCS_0000119	chi-square distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution		A probability distribution that with k degrees of freedom is the distribution of a sum of the squares of k independent standard normal random variables.
http://purl.obolibrary.org/obo/OBCS_0000123	transformed data set	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item		A data set that is produced as the output of a data transformation.
http://purl.obolibrary.org/obo/OBCS_0000124	inferential statistical data analysis objective	http://purl.obolibrary.org/obo/OBI_0200166	data transformation objective		A statistical data analysis objective where the aim is to make inference using population sample data. 
http://purl.obolibrary.org/obo/OBCS_0000125	exponential distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution		A continuous probability distribution that describes the time between events in a Poisson process, i.e. a process in which events occur continuously and independently at a constant average rate.
http://purl.obolibrary.org/obo/OBCS_0000126	random variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable		A statistical variable whose value is subject to variations due to chance (i.e. randomness, in a mathematical sense).
http://purl.obolibrary.org/obo/OBCS_0000127	data collection objective	http://purl.obolibrary.org/obo/IAO_0000005	objective specification		An objective specification where the aim is to collect data. 
http://purl.obolibrary.org/obo/OBCS_0000128	data collection from experiment	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that results in a collection of data generated from an experiment(s).
http://purl.obolibrary.org/obo/OBCS_0000129	data collection from survey	http://purl.obolibrary.org/obo/OBCS_0000132	data collection by sampling		A data collection by sampling process that results in a collection of data generated from an survey(s).
http://purl.obolibrary.org/obo/OBCS_0000130	data collection from literature	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that results in a collection of data from the literature.
http://purl.obolibrary.org/obo/OBCS_0000131	independent variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable		A statistical variable that is manipulated or controlled in a scientific study to test its effect on a dependent variable(s).
http://purl.obolibrary.org/obo/OBCS_0000134	continuous random variable	http://purl.obolibrary.org/obo/OBCS_0000126	random variable		A random variable which can take an infinite number of possible values.
http://purl.obolibrary.org/obo/OBCS_0000135	discrete random variable	http://purl.obolibrary.org/obo/OBCS_0000126	random variable		A random variable which may take on only a countable number of distinct values such as 0, 1, 2, 3, 4, ...
http://purl.obolibrary.org/obo/OBCS_0000137	data collection design	http://purl.obolibrary.org/obo/IAO_0000104	plan specification		A plan specification that provides a detailed outline of how data is collected.
http://purl.obolibrary.org/obo/OBCS_0000138	diagnostic validity	http://purl.obolibrary.org/obo/OBCS_0000060	validity		A validity that refers to the validity of a diagnosis, and associated diagnostic tests or screening tests in a clinical field such as medicine.
http://purl.obolibrary.org/obo/OBCS_0000139	data collection by censoring	http://purl.obolibrary.org/obo/OBCS_0000132	data collection by sampling		A data collection by sampling process that results in a collection of data generated from an censoring.
http://purl.obolibrary.org/obo/OBCS_0000143	experimental validity	http://purl.obolibrary.org/obo/OBCS_0000060	validity		A validity that refers to whether an experiment (or a study) is able to scientifically answer the questions it is intended to answer.
http://purl.obolibrary.org/obo/OBCS_0000146	2x2 contingency table	http://purl.obolibrary.org/obo/OBCS_0000145	contingency table		A contingency table with two rows and two columns that reports the number of false positives, false negatives, true positives, and true negatives. This allows more detailed analysis than mere proportion of correct guesses (accuracy).
http://purl.obolibrary.org/obo/OBCS_0000148	Wilcoxon signed-rank test	http://purl.obolibrary.org/obo/OBCS_0000236	non-parametric test		An inferential statistical data analysis used when comparing two related samples, matched samples, or repeated measurements on a single sample to assess whether their population mean ranks differ (i.e. it is a paired difference test). It can be used as an alternative to the paired Student's t-test, t-test for matched pairs, or the t-test for dependent samples when the population cannot be assumed to be normally distributed.
http://purl.obolibrary.org/obo/OBCS_0000149	data collection from observation	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that results in a collection of data generated from observation(s).
http://purl.obolibrary.org/obo/OBCS_0000151	statistical conclusion validity	http://purl.obolibrary.org/obo/OBCS_0000143	experimental validity		An experimental validity that refers to the degree to which conclusions about the relationship among variables based on the data are correct or ‘reasonable’.
http://purl.obolibrary.org/obo/OBCS_0000152	internal validity	http://purl.obolibrary.org/obo/OBCS_0000143	experimental validity		An experimental validity that refers to the degree to which conclusions about causal relationships can be made (e.g. cause and effect), based on the measures used, the research setting, and the whole research design.
http://purl.obolibrary.org/obo/OBCS_0000153	external validity	http://purl.obolibrary.org/obo/OBCS_0000143	experimental validity		An experimental validity that refers to the extent to which the (internally valid) results of a study can be held to be true for other cases, for example to different people, places or times. In other words, it is about whether findings can be validly generalized. If the same research study was conducted in those other cases, would it get the same results?
http://purl.obolibrary.org/obo/OBCS_0000154	ecological validity	http://purl.obolibrary.org/obo/OBCS_0000153	external validity		An external validity that refers to the extent to which research results can be applied to real life situations outside of research settings.
http://purl.obolibrary.org/obo/OBCS_0000155	construct validity	http://purl.obolibrary.org/obo/OBCS_0000053	test validity		A test validity that refers to the extent to which operationalizations of a construct (i.e., practical tests developed from a theory) do actually measure what the theory says they do. For example, to what extent is a questionnaire actually measuring "intelligence"?
http://purl.obolibrary.org/obo/OBCS_0000156	convergent validity	http://purl.obolibrary.org/obo/OBCS_0000155	construct validity		A construct validity that refers to the degree to which a measure is correlated with other measures that it is theoretically predicted to correlate with.
http://purl.obolibrary.org/obo/OBCS_0000157	discriminant validity	http://purl.obolibrary.org/obo/OBCS_0000155	construct validity		A construct validity that tests whether concepts or measurements that are supposed to be unrelated are, in fact, unrelated.
http://purl.obolibrary.org/obo/OBCS_0000158	content validity	http://purl.obolibrary.org/obo/OBCS_0000053	test validity		A test validity that determine whether it covers a representative sample of the behavior domain to be measured through systematic examination of the test content. For example, does an IQ questionnaire have items covering all areas of intelligence discussed in the scientific literature?
http://purl.obolibrary.org/obo/OBCS_0000159	criterion validity	http://purl.obolibrary.org/obo/OBCS_0000053	test validity		A test validity that refers to the correlation between the test and a criterion variable (or variables) taken as representative of the construct. In other words, it compares the test with other measures or outcomes (the criteria) already held to be valid. For example, employee selection tests are often validated against measures of job performance (the criterion), and IQ tests are often validated against measures of academic performance (the criterion).
http://purl.obolibrary.org/obo/OBCS_0000160	concurrent validity	http://purl.obolibrary.org/obo/OBCS_0000159	criterion validity		A criterion validity that refers to the degree to which the operationalization correlates with other measures of the same construct that are measured at the same time. When the measure is compared to another measure of the same type, they will be related (or correlated). In the selection test example, this would mean that the tests are administered to current employees and then correlated with their scores on performance reviews.
http://purl.obolibrary.org/obo/OBCS_0000161	predictive validity	http://purl.obolibrary.org/obo/OBCS_0000159	criterion validity		A criterion validity that refers to the degree to which the operationalization can predict (or correlate with) other measures of the same construct that are measured at some time in the future. With the selection test example, this would mean that the tests are administered to applicants, all applicants are hired, their performance is reviewed at a later time, and then their scores on the two measures are correlated.
http://purl.obolibrary.org/obo/OBCS_0000170	sum value	http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item		A data item that is produced as the output of a summing data transformation and represents the total value of the input data.
http://purl.obolibrary.org/obo/OBCS_0000171	data collection from online resource	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that is conducted  through an online process.
http://purl.obolibrary.org/obo/OBCS_0000172	data collection from online database	http://purl.obolibrary.org/obo/OBCS_0000171	data collection from online resource		An online data collection process that extracts data from an online database
http://purl.obolibrary.org/obo/OBCS_0000174	collection of incommensurate data	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that deals with incommensurate fields in the data.
http://purl.obolibrary.org/obo/OBCS_0000176	permutation	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A data transformation process that re-arrange the order of all or part of a set of data items.
http://purl.obolibrary.org/obo/OBCS_0000177	generation of missing data	http://purl.obolibrary.org/obo/OBI_0000011	planned process		A planned process that generates possible values of missing data
http://purl.obolibrary.org/obo/OBCS_0000178	processing incompatible data	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data transformation process that transforms incompatible data to compatible data.
http://purl.obolibrary.org/obo/OBCS_0000179	random permutation	http://purl.obolibrary.org/obo/OBCS_0000176	permutation		A permutation process that randomly orders a set of data items.
http://purl.obolibrary.org/obo/OBCS_0000180	factor analysis	http://purl.obolibrary.org/obo/OBCS_0000023	multivariate analysis		A multivariate analysis that uncovers the latent structure (dimensions) of a set of variables. It reduces attribute space from a larger number of variables to a smaller number of factors.
http://purl.obolibrary.org/obo/OBCS_0000181	MANOVA	http://purl.obolibrary.org/obo/OBCS_0000023	multivariate analysis		A multivariate analysis that compares multivariate sample means. As a multivariate procedure, it is used when there are two or more dependent variables.
http://purl.obolibrary.org/obo/OBCS_0000183	Bayesian analysis	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis that estimates parameters of an underlying distribution based on the observed distribution
http://purl.obolibrary.org/obo/OBCS_0000184	knuth shuffle	http://purl.obolibrary.org/obo/OBCS_0000179	random permutation		A random permutation process that generates a permutation of n items uniformly at random without retries. Specifically, it is to start with any permutation (for example, the identity permutation), and then go through the positions 1 through n − 1, and for each position i swap the element currently there with a randomly chosen element from positions i through n, inclusive.
http://purl.obolibrary.org/obo/OBCS_0000185	sorting	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A data transformation process that puts the data items in a set in a certain order.
http://purl.obolibrary.org/obo/OBCS_0000186	sorting based on numerical order	http://purl.obolibrary.org/obo/OBCS_0000185	sorting		A sorting process that sorts a set of data items based on the numberical order.
http://purl.obolibrary.org/obo/OBCS_0000187	sorting based on lexicorgraphic order	http://purl.obolibrary.org/obo/OBCS_0000185	sorting		A sorting process that sorts a set of data items based on a lexicorgraphic order
http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		A data processing that applies a deterministic mathematical function to each point in a data set; that is, each data point zi is replaced with the transformed value yi = f(zi), where f is a function.
http://purl.obolibrary.org/obo/OBCS_0000189	log2 transformation	http://purl.obolibrary.org/obo/OBI_0200094	logarithmic transformation		A logarithmic transformation that uses the base-2 logarithm.
http://purl.obolibrary.org/obo/OBCS_0000190	square root transformation	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A data transformation that performs an operation of square root.
http://purl.obolibrary.org/obo/OBCS_0000191	Anscombe transformation	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A variance-stabilizing transformation that transforms a random variable with a Poisson distribution into one with an approximately standard Gaussian distribution.
http://purl.obolibrary.org/obo/OBCS_0000192	rank-order transformation	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A data transformation that lists data items in a sequential arrangement
http://purl.obolibrary.org/obo/OBCS_0000194	continuous data value	http://purl.obolibrary.org/obo/OBCS_0000193	numerical data value		A data value that is continuous from an interval of possible outcomes.
http://purl.obolibrary.org/obo/OBCS_0000195	discrete data value	http://purl.obolibrary.org/obo/OBCS_0000193	numerical data value		A data value that is discrete, ie, counted.
http://purl.obolibrary.org/obo/OBCS_0000196	ordinal data value	http://purl.obolibrary.org/obo/OBCS_0000193	numerical data value		A data value that is an ordinal number, ie., a number that tells the position of something in a list.
http://purl.obolibrary.org/obo/OBCS_0000197	cardinal data value	http://purl.obolibrary.org/obo/OBCS_0000193	numerical data value		A data value that is a cardinal number, i.e., a number that says how many of something there are, such as one, two, three, four, five.
http://purl.obolibrary.org/obo/OBCS_0000199	nominal data value	http://purl.obolibrary.org/obo/OBCS_0000193	numerical data value		A data value that is a nominal number, ie., a number used only as a name, or to identify something (not as an actual value or position).
http://purl.obolibrary.org/obo/OBCS_0000200	continuous variable	http://purl.obolibrary.org/obo/OBCS_0000038	statistical variable		A continuous variable over a particular range of the real numbers is one whose value in that range must be such that, if the variable can take values a and b in that range, then it can also take any value between a and b.
http://purl.obolibrary.org/obo/OBCS_0000202	interval-scale variable	http://purl.obolibrary.org/obo/OBCS_0000200	continuous variable		A continuous variable that has order and equal intervals.
http://purl.obolibrary.org/obo/OBCS_0000203	continuous ordinal variable	http://purl.obolibrary.org/obo/OBCS_0000200	continuous variable		A continuous variable that occur when the measurement is continuous
http://purl.obolibrary.org/obo/OBCS_0000204	ratio-scale variable	http://purl.obolibrary.org/obo/OBCS_0000200	continuous variable		A continuous variable that is a continuous positive measurement on a nonlinear scale
http://purl.obolibrary.org/obo/OBCS_0000205	nominal variable	http://purl.obolibrary.org/obo/OBCS_0000201	discrete variable		A discrete variable that allows for only qualitative classification
http://purl.obolibrary.org/obo/OBCS_0000206	discrete ordinal variable	http://purl.obolibrary.org/obo/OBCS_0000205	nominal variable		A nominal variable, but its different states are ordered in a meaningful sequence
http://purl.obolibrary.org/obo/OBCS_0000207	dummy variable	http://purl.obolibrary.org/obo/OBCS_0000201	discrete variable		A quantitative variable can be transformed into a categorical variable, called a dummy variable by recoding the values
http://purl.obolibrary.org/obo/OBCS_0000208	preference variable	http://purl.obolibrary.org/obo/OBCS_0000201	discrete variable		A preference variable is a specific discrete variable, whose value is either in a decreasing or increasing order.
http://purl.obolibrary.org/obo/OBCS_0000209	multiple response variable	http://purl.obolibrary.org/obo/OBCS_0000201	discrete variable		A discrete variable which can assume more than one value. A typical example is a survey questionnaire about the use of computers in research. The respondents were asked to indicate the purpose(s) for which they use computers in their research work. The respondents could score more than one category.
http://purl.obolibrary.org/obo/OBCS_0000210	histogram distribution	http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution		A probability distribution that represents the probability distribution corresponding to a histogram of data values.
http://purl.obolibrary.org/obo/OBCS_0000212	directed graph	http://purl.obolibrary.org/obo/OBCS_0000216	mathematic graph		A mathematic graph that a set of objects (vertices or nodes) that are connected together, where all the edges are directed from one object to another. A directed graph is sometimes called a digraph or a directed network.
http://purl.obolibrary.org/obo/OBCS_0000213	relational graph	http://purl.obolibrary.org/obo/OBCS_0000216	mathematic graph		A mathematic graph that a set of objects (vertices or nodes) that are connected via numerous semantic relations.
http://purl.obolibrary.org/obo/OBCS_0000216	mathematic graph	http://purl.obolibrary.org/obo/IAO_0000030	information content entity		An information content entity that represents a set of objects (vertices or nodes) where some pairs of objects are connected by links.
http://purl.obolibrary.org/obo/OBCS_0000217	hierarchical tree	http://purl.obolibrary.org/obo/OBCS_0000216	mathematic graph		A mathematic graph that a set of objects (vertices or nodes) that are connected in a hierarchical from.
http://purl.obolibrary.org/obo/OBCS_0000222	normal distribution transformation	http://purl.obolibrary.org/obo/APOLLO_SV_00000796	dataset creating		A data transformation process that transforms a data set to a normal distribution.
http://purl.obolibrary.org/obo/OBCS_0000224	data set following probability distribution	http://purl.obolibrary.org/obo/IAO_0000100	data set		A data set that follows a probability distribution
http://purl.obolibrary.org/obo/OBCS_0000226	numerical data set	http://purl.obolibrary.org/obo/IAO_0000100	data set		A data set that is an aggregate of numerical data item. 
http://purl.obolibrary.org/obo/OBCS_0000229	data collection from document	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that results in a collection of data generated from document(s).
http://purl.obolibrary.org/obo/OBCS_0000230	data collection from eMedical record	http://purl.obolibrary.org/obo/OBCS_0000002	data collection		A data collection process that results in a collection of data generated from eMedical record(s).
http://purl.obolibrary.org/obo/OBCS_0000231	mortality rate	http://purl.obolibrary.org/obo/PATO_0000161	rate		A rate of deaths (in general, or due to a specific cause) that in a particular population, scaled to the size of that population, per unit of time. 
http://purl.obolibrary.org/obo/OBCS_0000232	hospital unit  shift rate	http://purl.obolibrary.org/obo/PATO_0000161	rate		A rate of unit shif in a hospital. 
http://purl.obolibrary.org/obo/OBCS_0000233	transformed data item	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is produced as the output of a data transformation.
http://purl.obolibrary.org/obo/OBCS_0000234	eMedical record  data transformation	http://purl.obolibrary.org/obo/OBCS_0000188	data transformation in statistics		A data transformation in statistics that processes the data matrix collected from eMedical records to a form that is ready for further data analysis.
http://purl.obolibrary.org/obo/STATO_0000023	studentized range distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution		The studentized range (q) distribution is a probability distribution used by the Tukey Honestly Significant Difference test. 

The distribution of the statistic
[x̄(k)- x̄(1)]/(s/√n)
where random samples of size n have been taken from k independent and identically distributed normal populations, with x̄(1) and x̄(k) being, respectively, the smallest and largest of the k sample means, and s2 being the pooled estimate of the common variance. This statistic is particularly used in multiple comparison tests.
http://purl.obolibrary.org/obo/STATO_0000040	MA plot	http://purl.obolibrary.org/obo/IAO_0000184	scatter plot		an MA plot is a scatter plot of the log intensity ratios M = log_2(T/R) versus the average log intensities A = log_2(T*T)/2, where T and R represent the signal intensities in the test and reference channels respectively.
http://purl.obolibrary.org/obo/STATO_0000057	null hypothesis	http://purl.obolibrary.org/obo/OBI_0001908	testable hypothesis		A null hypothesis is a statistical hypothesis that is tested for possible rejection under the assumption that it is true (usually that observations are the result of chance). The concept was introduced by R. A. Fisher.
The hypothesis contrary to the null hypothesis, usually that the observations are the result of a real effect, is known as the alternative hypothesis.[wolfram alpha]
http://purl.obolibrary.org/obo/STATO_0000060	hypergeometric distribution	http://purl.obolibrary.org/obo/OBCS_0000067	discrete probability distribution		hypergeometric distribution is a probability distribution that describes the probability of  k successes in n draws from a finite population of size  N containing  K successes without replacement
http://purl.obolibrary.org/obo/STATO_0000066	Cleveland dot plot	http://purl.obolibrary.org/obo/IAO_0000037	dot plot		Cleveland dot plot is a dot plot which plots points that each belong to one of several categories. They are an alternative to bar charts or pie charts, and look somewhat like a horizontal bar chart where the bars are replaced by a dots at the values associated with each category. Compared to (vertical) bar charts and pie charts, Cleveland argues that dot plots allow more accurate interpretation of the graph by readers by making the labels easier to read, reducing non-data ink (or graph clutter) and supporting table look-up.which
http://purl.obolibrary.org/obo/STATO_0000103	multinomial distribution	http://purl.obolibrary.org/obo/OBCS_0000067	discrete probability distribution		the multinomial distribution is a probability distribution which gives the probability of any particular combination of numbers of successes for various categories defined in the context of  n independent trials each of which leads to a success for exactly one of k categories, with each category having a given fixed success probability.
http://purl.obolibrary.org/obo/STATO_0000112	Funnel plot	http://purl.obolibrary.org/obo/IAO_0000184	scatter plot		a Funnel plot is a scatter plot of treatment effect versus a measure of study size and aims to provide a visual aid to detecting bias or systematic heterogeneity. A symmetric inverted funnel shape arises from a ‘well-behaved’ data set, in which publication bias is unlikely. An asymmetric funnel indicates a relationship between treatment effect and study size. 
Known caveats: If high precision studies really are different from low precision studies with respect to effect size (e.g., due to different populations examined) a funnel plot may give a wrong impression of publication bias. The appearance of the funnel plot can change quite dramatically depending on the scale on the y-axis — whether it is the inverse square error or the trial size.
Funnel plot was introduced by Light and Palmer in 1984.
http://purl.obolibrary.org/obo/STATO_0000120	bean plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		beanplot is a plot in which (one or) multiple batches ("beans") are shown. Each bean consists of a density trace, which is mirrored to
form a polygon shape. Next to that, a one-dimensional scatter plot shows all the individual measurements, like in a stripchart.

The name beanplot stems from green beans. The density shape can be seen as the pod of a green bean, while the scatter plot shows the seeds inside the pod.
http://purl.obolibrary.org/obo/STATO_0000122	pedigree chart	http://purl.obolibrary.org/obo/IAO_0000038	graph		a pedigree chart is a graph which plots parent child relations
http://purl.obolibrary.org/obo/STATO_0000125	Wilkinson dot plot	http://purl.obolibrary.org/obo/IAO_0000037	dot plot		The dot plot as a representation of a distribution consists of group of data points plotted on a simple scale. Dot plots are used for continuous, quantitative, univariate data. Data points may be labelled if there are few of them.
http://purl.obolibrary.org/obo/STATO_0000126	volcano plot	http://purl.obolibrary.org/obo/IAO_0000184	scatter plot		volcano plot is a kind of scatter plot which graphs the negative log of the p-value (significance) on the y-axis versus log2 of fold-change between 2 conditions on the  x-axis. 
It is a popular method for visualizing differential occurence of variables between 2 conditions.
http://purl.obolibrary.org/obo/STATO_0000128	Altman box and whisker plot	http://purl.obolibrary.org/obo/STATO_0000243	box and whisker plot		Altman Box and Whisker plot is a variation of Tukey Box and Whisker plot which use the criteria of Altman to create the 'whisker' of the plot.
http://purl.obolibrary.org/obo/STATO_0000132	Hotelling T2 distribution	http://purl.obolibrary.org/obo/OBCS_0000010	probability distribution		Hotelling T squared distribution is a probability distribution used in multivariate hypothesis testing, which is a univariate distribution proportional to the F-distribution and arises importantly as the distribution of a set of statistics which are natural generalizations of the statistics underlying Student's t-distribution.
In particular, the distribution arises in multivariate statistics in undertaking tests of the differences between the (multivariate) means of different populations, where tests for univariate problems would make use of a t-test.
The distribution is named for Harold Hotelling, who developed it[1] as a generalization of Student's t-distribution.
This distribution is commonly used to describe the sample Mahalanobis distance between two populations.
http://purl.obolibrary.org/obo/STATO_0000145	geometric distribution	http://purl.obolibrary.org/obo/STATO_0000283	negative binomial distribution		the geometric distribution is a negative binomial distribution where r is 1.
It is useful for modeling the runs of consecutive successes (or failures) in repeated independent trials of a system.

The geometric distribution models the number of successes before one failure in an independent succession of tests where each test results in success or failure.


The geometric distribution with prob = p has density

p(x) = p (1-p)^x

for x = 0, 1, 2, …, 0 < p ≤ 1.

If an element of x is not integer, the result of dgeom is zero, with a warning.

The quantile is defined as the smallest value x such that F(x) ≥ p, where F is the distribution function.
http://purl.obolibrary.org/obo/STATO_0000147	LD plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		Linkage Disequilibrium plot is a graph which represents pairwise linkage disequilibrium measures between SNP as a heatmap
http://purl.obolibrary.org/obo/STATO_0000154	violin plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		a violin plot is a plot combining the features of box plot and kernel density plot. The violin plot is therefore similar to box plot but it incorporated in the display the probability density of the data at different values.
Typically violin plots will include a marker for the median of the data and a box indicating the interquartile range, as in standard box plots.
http://purl.obolibrary.org/obo/STATO_0000159	stacked bar chart	http://purl.obolibrary.org/obo/STATO_0000166	bar chart		Stacked bar chart is a bar which is used to compare overall quantities across items while showing the contribution of category to the total amount. Stacked bar chart can be used  for highlighting the total as they visually aggregate all of the categories in a group while indicating a part to whole relationship. The downside is that it becomes harder to compare the sizes of the individual categories.
http://purl.obolibrary.org/obo/STATO_0000165	pie chart	http://purl.obolibrary.org/obo/IAO_0000038	graph		a pie chart is a graph in which a circular graph is divided into sector illustrating numerical proportion, meaning that the arc length of each sector (and consequently its central angle and area), is proportional to the quantity it represents.
http://purl.obolibrary.org/obo/STATO_0000166	bar chart	http://purl.obolibrary.org/obo/IAO_0000038	graph		the bart chart is a graph resulting from plotting rectangular bars with lengths proportional to the values that they represent.
http://purl.obolibrary.org/obo/STATO_0000168	real time quantitative pcr plot	http://purl.obolibrary.org/obo/IAO_0000573	line graph		a real time quantitative pcr plot is a line graph which plots the signal fluorescence intensity as a function of the number of PCR cycle
http://purl.obolibrary.org/obo/STATO_0000171	Spear box and whisker plot	http://purl.obolibrary.org/obo/STATO_0000243	box and whisker plot		Spear Box and Whisker plot is a variation of Tukey Box and Whisker plot which use the criteria of Spear to create the 'whisker' of the plot.
http://purl.obolibrary.org/obo/STATO_0000174	Forest plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		A forest plot  is a graph designed to illustrate the relative strength of treatment effects in multiple quantitative scientific studies addressing the same question.
http://purl.obolibrary.org/obo/STATO_0000177	beta distribution	http://purl.obolibrary.org/obo/OBCS_0000066	continuous probability distribution		the beta distribution is a continuous probability distributions defined on the interval [0, 1] parametrized by two positive shape parameters, denoted by α and β, that appear as exponents of the random variable and control the shape of the distribution
http://purl.obolibrary.org/obo/STATO_0000180	standard normal distribution	http://purl.obolibrary.org/obo/OBCS_0000005	normal distribution		standard normal distribution is a normal distribution with variance = 1 and mean=0
http://purl.obolibrary.org/obo/STATO_0000186	Lineweaver-Burk plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		Lineweaver-Burk plot is a graph which  is the graphical representation of the Lineweaver–Burk equation of enzyme kinetics, described by Hans Lineweaver and Dean Burk in 1934. The plot provides a useful graphical method for analysis of the Michaelis–Menten equation.
It was widely used to determine important terms in enzymology and enzyme kinetics as  the x-intercept of the graph represents −1/Km and the y-intercept of such a graph is equivalent to the inverse of Vmax
http://purl.obolibrary.org/obo/STATO_0000219	RT-PCR standard curve	http://purl.obolibrary.org/obo/IAO_0000573	line graph		a real time pcr standard curve is a line graph which plots the fluorescence intensity signal as a function of the concentration of a sample used as reference  and used to determine relative abundance of test samples
http://purl.obolibrary.org/obo/STATO_0000241	Q-Q plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		Q-Q plot or quantile-quantile plot is the output of a graphical method for comparing two probability distributions by plotting their quantiles against each other
http://purl.obolibrary.org/obo/STATO_0000243	box and whisker plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		a box plot is a graph which plots datasets relying on their quartiles and the interquartile range to create the box and the whiskers.
http://purl.obolibrary.org/obo/STATO_0000256	manhattan plot for gwas	http://purl.obolibrary.org/obo/IAO_0000184	scatter plot		a manhattan plot for gwas is a kind of scatter plot used to facilitate presentation of genome-wide association study (GWAS) data. Genomic coordinates are displayed along the X-axis, with the negative logarithm of the association P-value for each single nucleotide polymorphism displayed on the Y-axis.
http://purl.obolibrary.org/obo/STATO_0000262	Bernoulli distribution	http://purl.obolibrary.org/obo/OBCS_0000044	binomial distribution		Bernoulli distribution is a binomial distribution where the number of trials is equal to 1.

notation: B(1,p)

The mean is p

The variance is p*q
http://purl.obolibrary.org/obo/STATO_0000263	Galbraith plot	http://purl.obolibrary.org/obo/IAO_0000184	scatter plot		Galbraith (Radial) plot is a scatter plot which can be used in the meta-analytic context to examine the data for heterogeneity. For a fixed-effects model, the plot shows the inverse of the standard errors on the horizontal axis against the individual observed effect sizes or outcomes standardized by their corresponding standard errors on the vertical axis.
Radial plots were introduced by Rex Galbraith (1988a, 1988b, 1994).

http://purl.obolibrary.org/obo/STATO_0000267	grouped bar chart	http://purl.obolibrary.org/obo/STATO_0000166	bar chart		grouped bar chart is a kind of bar chart which juxtaposes the  discrete values for each of the possible value of a given categorical variable, thus providing  within group comparison. Grouped bar charts are good for comparing between each element in the categories, and comparing elements across categories. However, the grouping can make it harder to tell the difference between the total of each group.
http://purl.obolibrary.org/obo/STATO_0000274	receiver operational characteristics curve	http://purl.obolibrary.org/obo/IAO_0000038	graph		receiver operational characteristics curve is a graphical plot which illustrates the performance of a binary classifier system as its discrimination threshold (aka cut-off point) is varied by plotting  sensitivity vs (1 − specificity)
http://purl.obolibrary.org/obo/STATO_0000283	negative binomial distribution	http://purl.obolibrary.org/obo/OBCS_0000067	discrete probability distribution		negative binomial probability distribution is a discrete probability distribution of the number of successes in a sequence of Bernoulli trials before a specified (non-random) number of failures (denoted r) occur. The negative binomial distribution, also known as the Pascal distribution or Pólya distribution, gives the probability of  r-1 successes and x  failures in x+r-1 trials, and success on the (x+r)th trial.
http://purl.obolibrary.org/obo/OBI_0003333	computed image data set	http://purl.obolibrary.org/obo/OBI_0003327	image data set		An image data set that is the output of an image data set analysis.
http://purl.obolibrary.org/obo/OBI_0003334	reconstructed magnetic resonance image data set	http://purl.obolibrary.org/obo/OBI_0003328	magnetic resonance image data set		An image data set that is the direct output of a raw magnetic resonance image data set reconstruction or a transformation of another MR image data set.
http://purl.obolibrary.org/obo/OBI_0003354	raw magnetic resonance image data set	http://purl.obolibrary.org/obo/OBI_0003331	raw image data set		An image data set that is the direct output of an magnetic resonance imaging assay and whose values encode spatial frequencies produced by the NMR or MRI instrument.
http://purl.obolibrary.org/obo/OBI_0003356	raw magnetic resonance image data set reconstruction	http://purl.obolibrary.org/obo/OBI_0003355	image data set analysis		A process that transforms raw magnetic resonance image data from an NMR/MRI machine into a reconstructed magnetic resonance image data set.
http://purl.obolibrary.org/obo/OBI_0003576	skin of body microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a skin of body specimen.
http://purl.obolibrary.org/obo/OBI_0003577	skin of body microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a skin of body microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003578	bone marrow microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a bone marrow specimen.
http://purl.obolibrary.org/obo/OBI_0003579	bone marrow microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a bone marrow microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003580	nasal aspirate microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a nasal aspirate specimen.
http://purl.obolibrary.org/obo/OBI_0003581	nasal aspirate microbiology datum	http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum		An organism detection datum that is the specified output of a nasal aspirate microbiology assay.
http://purl.obolibrary.org/obo/CHEBI_16991	deoxyribonucleic acid	http://purl.obolibrary.org/obo/CHEBI_33696	nucleic acid		High molecular weight, linear polymers, composed of nucleotides containing deoxyribose and linked by phosphodiester bonds; DNA contain the genetic information of organisms.
http://purl.obolibrary.org/obo/CHEBI_33696	nucleic acid	http://purl.obolibrary.org/obo/CHEBI_33839	macromolecule		A macromolecule made up of nucleotide units and hydrolysable into certain pyrimidine or purine bases (usually adenine, cytosine, guanine, thymine, uracil), D-ribose or 2-deoxy-D-ribose and phosphoric acid.
http://purl.obolibrary.org/obo/CL_0000000	cell	http://purl.obolibrary.org/obo/BFO_0000040	material entity		A material entity of anatomical origin (part of or deriving from an organism) that has as its parts a maximally connected cell compartment surrounded by a plasma membrane.
http://purl.obolibrary.org/obo/CL_0000010	cultured cell	http://purl.obolibrary.org/obo/CL_0000578	experimentally modified cell in vitro		A cell in vitro that is or has been maintained or propagated as part of a cell culture.
http://purl.obolibrary.org/obo/CL_0000578	experimentally modified cell in vitro	http://purl.obolibrary.org/obo/CL_0001034	cell in vitro		A cell in vitro that has undergone physical changes as a consequence of a deliberate and specific experimental procedure.
http://purl.obolibrary.org/obo/CL_0001034	cell in vitro	http://purl.obolibrary.org/obo/CL_0000000	cell		A cell that is maintained or propagated in a controlled artificial environment for use in an investigation.
http://purl.obolibrary.org/obo/UBERON_0000178	blood	http://purl.obolibrary.org/obo/UBERON_0006314	bodily fluid		A fluid that is composed of blood plasma and erythrocytes.
http://purl.obolibrary.org/obo/UBERON_0002048	lung	http://purl.obolibrary.org/obo/UBERON_0004119	endoderm-derived structure		Respiration organ that develops as an outpocketing of the esophagus.
http://purl.obolibrary.org/obo/OBI_0003417	antigen specific antibodies assay datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of an antigen specific antibodies assay.
http://purl.obolibrary.org/obo/OBI_0003420	antigen specific antibodies in blood assay datum	http://purl.obolibrary.org/obo/OBI_0003417	antigen specific antibodies assay datum		An antigen specific antibodies assay datum that is the specified output of an antigen specific antibodies in blood assay.
http://purl.obolibrary.org/obo/OBI_0003421	antigen specific antibodies in milk assay datum	http://purl.obolibrary.org/obo/OBI_0003417	antigen specific antibodies assay datum		An antigen specific antibodies assay datum that is the specified output of an antigen specific antibodies in milk assay.
http://purl.obolibrary.org/obo/CHEBI_33839	macromolecule	http://purl.obolibrary.org/obo/CHEBI_23367	molecular entity		A macromolecule is a molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
http://purl.obolibrary.org/obo/GO_0006306	DNA methylation	http://purl.obolibrary.org/obo/GO_0008150	biological_process		The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
http://purl.obolibrary.org/obo/GO_0050896	response to stimulus	http://purl.obolibrary.org/obo/GO_0008150	biological_process		Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism.
http://purl.obolibrary.org/obo/UBERON_0000061	anatomical structure	http://purl.obolibrary.org/obo/UBERON_0000465	material anatomical entity		Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome.
http://purl.obolibrary.org/obo/UBERON_0000062	organ	http://purl.obolibrary.org/obo/UBERON_0010000	multicellular anatomical structure		Anatomical structure that performs a specific function or group of functions [WP].
http://purl.obolibrary.org/obo/UBERON_0000064	organ part	http://purl.obolibrary.org/obo/UBERON_0010000	multicellular anatomical structure		A multicellular structure that is a part of an organ.
http://purl.obolibrary.org/obo/UBERON_0000072	proximo-distal subdivision of respiratory tract	http://purl.obolibrary.org/obo/UBERON_0013522	subdivision of tube		An section of a respiratory tract.
http://purl.obolibrary.org/obo/UBERON_0000174	excreta	http://purl.obolibrary.org/obo/UBERON_0000463	organism substance		A portion of organism substance that is the product of an excretion process that will be eliminated from the body. An excretion process is elimination by an organism of the waste products that arise as a result of metabolic activity.
http://purl.obolibrary.org/obo/UBERON_0000344	mucosa	http://purl.obolibrary.org/obo/UBERON_0000064	organ part		A lining of mostly endodermal origin, covered in epithelium, which is involved in absorption and secretion. They line various body cavities that are exposed to the external environment and internal organs. It is at several places continuous with skin: at the nostrils, the lips, the ears, the genital area, and the anus. The sticky, thick fluid secreted by the mucous membranes and gland is termed mucus. The term mucous membrane refers to where they are found in the body and not every mucous membrane secretes mucus[WP].
http://purl.obolibrary.org/obo/UBERON_0000463	organism substance	http://purl.obolibrary.org/obo/UBERON_0000465	material anatomical entity		Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body.
http://purl.obolibrary.org/obo/UBERON_0000465	material anatomical entity	http://purl.obolibrary.org/obo/BFO_0000040	material entity		Anatomical entity that has mass.
http://purl.obolibrary.org/obo/UBERON_0000477	anatomical cluster	http://purl.obolibrary.org/obo/UBERON_0000465	material anatomical entity		Anatomical group whose component anatomical structures lie in close proximity to each other.
http://purl.obolibrary.org/obo/UBERON_0000479	tissue	http://purl.obolibrary.org/obo/UBERON_0010000	multicellular anatomical structure		Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation.
http://purl.obolibrary.org/obo/UBERON_0001087	pleural fluid	http://purl.obolibrary.org/obo/UBERON_0007779	transudate		Transudate contained in the pleural cavity.
http://purl.obolibrary.org/obo/UBERON_0001088	urine	http://purl.obolibrary.org/obo/UBERON_0000174	excreta		Excretion that is the output of a kidney.
http://purl.obolibrary.org/obo/UBERON_0001359	cerebrospinal fluid	http://purl.obolibrary.org/obo/UBERON_0007779	transudate		A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.
http://purl.obolibrary.org/obo/UBERON_0001460	arm	http://purl.obolibrary.org/obo/UBERON_0010000	multicellular anatomical structure		The part of the forelimb extending from the shoulder to the autopod[cjm].
http://purl.obolibrary.org/obo/UBERON_0001826	nasal cavity mucosa	http://purl.obolibrary.org/obo/UBERON_0004121	ectoderm-derived structure		The mucous membrane that lines the nasal cavity[MP].
http://purl.obolibrary.org/obo/UBERON_0001913	milk	http://purl.obolibrary.org/obo/UBERON_0006314	bodily fluid		An emulsion of fat globules within a fluid that is secreted by the mammary gland during lactation.
http://purl.obolibrary.org/obo/UBERON_0001988	feces	http://purl.obolibrary.org/obo/UBERON_0000174	excreta		Portion of semisolid bodily waste discharged through the anus[MW,modified].
http://purl.obolibrary.org/obo/UBERON_0002097	skin of body	http://purl.obolibrary.org/obo/UBERON_0004121	ectoderm-derived structure		The organ covering the body that consists of the dermis and epidermis.
http://purl.obolibrary.org/obo/UBERON_0004119	endoderm-derived structure	http://purl.obolibrary.org/obo/UBERON_0000061	anatomical structure		An anatomical structure that develops (entirely or partially) from the endoderm.
http://purl.obolibrary.org/obo/UBERON_0004121	ectoderm-derived structure	http://purl.obolibrary.org/obo/UBERON_0000061	anatomical structure		An anatomical structure that develops (entirely or partially) from the ectoderm.
http://purl.obolibrary.org/obo/UBERON_0006314	bodily fluid	http://purl.obolibrary.org/obo/UBERON_0000463	organism substance		Liquid components of living organisms. includes fluids that are excreted or secreted from the body as well as body water that normally is not.
http://purl.obolibrary.org/obo/UBERON_0006538	respiratory system fluid/secretion	http://purl.obolibrary.org/obo/UBERON_0000463	organism substance		A portion of organism substance that secreted_by a respiratory system.
http://purl.obolibrary.org/obo/UBERON_0007311	sputum	http://purl.obolibrary.org/obo/UBERON_0006538	respiratory system fluid/secretion		Matter ejected from the lungs, bronchi, and trachea, through the mouth.
http://purl.obolibrary.org/obo/UBERON_0007779	transudate	http://purl.obolibrary.org/obo/UBERON_0006314	bodily fluid		Any bodily fluid that has passed through a membrane such as the capillary wall, as a result of unbalanced hydrostatic and osmotic forces.
http://purl.obolibrary.org/obo/UBERON_0010000	multicellular anatomical structure	http://purl.obolibrary.org/obo/UBERON_0000061	anatomical structure		An anatomical structure that has more than one cell as a part.
http://purl.obolibrary.org/obo/UBERON_0012168	umbilical cord blood	http://purl.obolibrary.org/obo/UBERON_0013755	arterial blood		Blood that remains in the placenta and in the attached umbilical cord after childbirth[WP].
http://purl.obolibrary.org/obo/UBERON_0013755	arterial blood	http://purl.obolibrary.org/obo/UBERON_0000178	blood		A blood that is part of a artery.
http://purl.obolibrary.org/obo/STATO_0000044	one-way ANOVA	http://purl.obolibrary.org/obo/OBI_0200201	ANOVA		one-way anova is an analysis of variance where the different groups being compared are associated with the factor levels of only one independent variable. The null hypothesis is an absence of difference between the means calculated for each of the groups. The test assumes normality and equivariance of the data.
http://purl.obolibrary.org/obo/STATO_0000045	two-way ANOVA	http://purl.obolibrary.org/obo/OBI_0200201	ANOVA		two-way anova is an analysis of variance where the different groups being compared are associated the factor levels of exatly 2 independent variables. The null hypothesis is an absence of difference between the means calculated for each of the groups. The test assumes normality and equivariance of the data.
http://purl.obolibrary.org/obo/STATO_0000048	multiway ANOVA	http://purl.obolibrary.org/obo/OBI_0200201	ANOVA		Multi-way anova is an analysis of variance where the difference groups being compared are associated to the factor levels of more than 2 independent variables. The null hypothesis is an absence of difference between the means calculated for each of the groups. The test assumes normality and equivariance of the data.
http://purl.obolibrary.org/obo/STATO_0000095	paired t-test	http://purl.obolibrary.org/obo/STATO_0000202	within subject comparison statistical test		paired t-test is a statistical test which is specifically designed to analysis differences between paired observations in the case of studies realizing repeated measures design with only 2 repeated measurements per subject (before and after treatment for example)
http://purl.obolibrary.org/obo/STATO_0000123	r2 measure of linkage desequilibrium	http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient		r2 is a correlation coefficient which is computed over the frequency of 2 dichotomous variable and is used as a measure of Linkage Disequilibrium and as input data item to the creation of an LD plot
http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient	http://purl.obolibrary.org/obo/OBI_0000071	quantitative confidence value		The correlation coefficient of two variables in a data sample is their covariance divided by the product of their individual standard deviations. It is a normalized measurement of how the two are linearly related.
http://purl.obolibrary.org/obo/STATO_0000201	Spearman's rank correlation coefficient	http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient		Spearman's rank correlation coefficient is a correlation coefficient which is a nonparametric measure of statistical dependence between two ranked variables. It assesses how well the relationship between two variables can be described using a monotonic function. If there are no repeated data values, a perfect Spearman correlation of +1 or −1 occurs when each of the variables is a perfect monotone function of the other.
Spearman's coefficient may be used when the conditions for computing Pearson's correlation are not met (e.g linearity, normality of the 2 continuous variables) but may require a ranking transformation of the variables
http://purl.obolibrary.org/obo/STATO_0000202	within subject comparison statistical test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		within subject comparison statistical test is a kind of statistical test which evaluates if a change occurs within one experimental unit over time following a treatment or an event
http://purl.obolibrary.org/obo/STATO_0000212	tetrachoric correlation coefficient	http://purl.obolibrary.org/obo/STATO_0000269	polychoric correlation coefficient		a tetrachoric correlation coefficient is a polychoric correlation coefficient for 2 dichotomous variables used as proxy for correlation between 2 continuous latent variables.
http://purl.obolibrary.org/obo/STATO_0000240	Kendall's correlation coefficient	http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient		Kendall's correlation coefficient is a correlation coefficient between 2 ordinal variables (natively or following a ranking procedure) and may be used when the conditions for computing Pearson's correlation are not met (e.g linearity, normality of the 2 continuous variables)
http://purl.obolibrary.org/obo/STATO_0000260	repeated measure ANOVA	http://purl.obolibrary.org/obo/STATO_0000202	within subject comparison statistical test		repeated measure ANOVA is a kind of ANOVA specifically developed for non-independent observations as found when repeated measurements on the sample experimental unit. 
repeated measure ANOVA is sensitive to departure from normality (evaluation using Bartlett's test), more so in the case of unbalanced groups (i.e. different sizes of sample populations).
Departure from sphericity (evaluation  using Mauchly'test)  used to be an issue which is now handled robustly by modern tools such as R's lme4 or nlme, which accommodate dependence assumptions other than sphericity.
http://purl.obolibrary.org/obo/STATO_0000269	polychoric correlation coefficient	http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient		polychoric correlation coefficient is a correlation coefficient which is computed over 2 variables to characterise an association by proxy with 2  (latent) variables which are assumed to be continuous and normally distributed.
http://purl.obolibrary.org/obo/STATO_0000280	Pearson's correlation coefficient	http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient		The Pearson's correlation coefficient is a correlation coefficient which evaluates two continuous variables for association strength in a data sample. It assumes that both variables are normally distributed and linearity exists. 
The coefficient is calculated by dividing their covariance with the product of their individual standard deviations. It is a normalized measurement of how the two are linearly related.
http://purl.obolibrary.org/obo/STATO_0000286	one tailed test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		a one-tailed test is a statistical test which, assuming an unskewed probability distribution, allocates all of the significance level to evaluate only one hypothesis to explain a difference.
The one-tailed test provides more power to detect an effect in one direction by not testing the effect in the other direction.
one-tailed test should be preceded by two-tailed test in order to avoid missing out on detecting alternate effect explaining an observed difference.
http://purl.obolibrary.org/obo/OBI_0003327	image data set	http://purl.obolibrary.org/obo/IAO_0000100	data set		A data set that is comprised of multidimensional structured measurements and metadata required for a morphological representation of an entity. An image data set can be the source from which an image (such as a 2D image using pixels or a 3D image using voxels) is produced.
http://purl.obolibrary.org/obo/SO_0001410	experimental_feature	http://purl.obolibrary.org/obo/SO_0000001	region		A region which is the result of some arbitrary experimental procedure. The procedure may be carried out with biological material or inside a computer.
http://purl.obolibrary.org/obo/OBI_0003416	mid-upper arm circumference datum	http://purl.obolibrary.org/obo/IAO_0000408	length measurement datum		A length measurement datum that is the specified output of an assay measuring the length around an upper arm, taken midway along the upper arm.
http://purl.obolibrary.org/obo/OBI_0000969	dose specification	http://purl.obolibrary.org/obo/IAO_0000033	directive information entity		a directive information entity that describes the dose that will be administered to a target
http://purl.obolibrary.org/obo/STATO_0000287	two tailed test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		a two tailed test is a statistical test which assess the null hypothesis of absence of difference assuming a symmetric (not skewed) underlying probability distribution by allocating half of the significance level selected to each of the direction of change which could explain a difference (for example, a difference can be an excess or a loss).
http://purl.obolibrary.org/obo/OBCS_0000214	sensitivity disposition	http://purl.obolibrary.org/obo/BFO_0000016	disposition		A disposition that inheres in a population of continuant and is realized in a test process (e.g., disease diagnosis).
http://purl.obolibrary.org/obo/OBI_0002565	adapter-sequence trimming	http://purl.obolibrary.org/obo/OBI_0002585	sequence trimming		A data transformation in which adapter sequences at the end of a molecular sequence are cut (removed).
http://purl.obolibrary.org/obo/OBI_0003079	temperature measurement datum	http://purl.obolibrary.org/obo/IAO_0000032	scalar measurement datum		A scalar measurement datum that is the result of measuring temperature.
http://purl.obolibrary.org/obo/GO_0008150	biological_process	http://purl.obolibrary.org/obo/BFO_0000015	process		A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
http://purl.obolibrary.org/obo/OBCS_0000167	peak calling	http://purl.obolibrary.org/obo/OBCS_0000121	inferential statistical data analysis		An inferential statistical data analysis to identify protein-binding regions in a genome sequence from the data generated from a ChIP-sequencing or ChIP-chip experiment. When the protein is a transcription factor, the region is a transcription factor binding site (TFBS).
http://purl.obolibrary.org/obo/OBCS_0000235	medical test sensitivity disposition	http://purl.obolibrary.org/obo/OBCS_0000214	sensitivity disposition		A sensitivity disposition that is related to a medical test and inheres in a population of organism.
http://purl.obolibrary.org/obo/OBI_0002145	antigen specific antibodies assay	http://purl.obolibrary.org/obo/OBI_0000443	analyte assay		An analyte assay that measures the presence or amount of antibodies to a specified antigen.
http://purl.obolibrary.org/obo/OBI_0002650	biopsy	http://purl.obolibrary.org/obo/OBI_0600005	collecting specimen from organism		A specimen collection that obtains a sample of tissue or cell from a living multicellular organism body for diagnostic purposes by means intended to be minimally invasive.
http://purl.obolibrary.org/obo/OBI_0002662	bone marrow biopsy	http://purl.obolibrary.org/obo/OBI_0002650	biopsy		A biopsy where a small amount of bone and a small amount of fluid and bone marrow are collected.
http://purl.obolibrary.org/obo/OBI_0002746	induced sputum specimen	http://purl.obolibrary.org/obo/OBI_0002508	sputum specimen		A sputum specimen that is collected from an organism following its inhalation of a nebulized salt solution.
http://purl.obolibrary.org/obo/OBI_0002747	passage process	http://purl.obolibrary.org/obo/OBI_0000094	material processing		A material processing that consists of first growing an organism in an environmental system and then removing the organism to be grown in another environmental system, a process which may be repeated with the objective of altering the organism or increasing its number.
http://purl.obolibrary.org/obo/OBI_0002748	passage history record	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is about the sequence of environmental systems in each of which is grown an organism in a passage process.
http://purl.obolibrary.org/obo/OBI_0002769	karyotype information	http://purl.obolibrary.org/obo/OBI_0001404	genetic characteristics information		A genetic characteristics information that is about the number and appearance of chromosomes in the nucleus of an eukaryotic cell.
http://purl.obolibrary.org/obo/OBI_0002770	partial karyotype information	http://purl.obolibrary.org/obo/OBI_0002769	karyotype information		A karyotype information that is about the structural variation of partial genome rather than whole genome.
http://purl.obolibrary.org/obo/OBI_0002771	full karyotype information	http://purl.obolibrary.org/obo/OBI_0002769	karyotype information		A karyotype information that is about the structural variation of the whole genome.
http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		A specimen that is derived from some bodily fluid
http://purl.obolibrary.org/obo/OBI_2000012	umbilical cord blood specimen	http://purl.obolibrary.org/obo/OBI_2000013	arterial blood specimen		A specimen that is derived from some umbilical cord blood
http://purl.obolibrary.org/obo/OBI_2000013	arterial blood specimen	http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen		A specimen that is derived from some arterial blood
http://purl.obolibrary.org/obo/OGMS_0000073	diagnosis	http://purl.obolibrary.org/obo/OGMS_0000123	clinical data item		The representation of a conclusion of a diagnostic process.
http://purl.obolibrary.org/obo/OBI_0002444	measurand role	http://purl.obolibrary.org/obo/BFO_0000023	role		A role borne by a material entity and realized in an assay which achieves the objective to measure the magnitude/concentration/amount of the measurand in the entity bearing evaluant role.
http://purl.obolibrary.org/obo/OBI_0003040	blood assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has a blood specimen as evaulant.
http://purl.obolibrary.org/obo/OBI_0003043	urine assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that has a urine specimen as evaluant.
http://purl.obolibrary.org/obo/OBI_0003056	proportion mapped reads	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		A sequence datum that is the specified output of a read mapping and is the ratio of the count of mapped reads to the total count of reads.
http://purl.obolibrary.org/obo/OBI_0003063	insecticide resistance datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is about resistance to an insecticide.
http://purl.obolibrary.org/obo/OBI_0003064	organism detection datum	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is the specified output of an organism detection assay.
http://purl.obolibrary.org/obo/OBI_0003066	easting coordinate measurement datum	http://purl.obolibrary.org/obo/IAO_0000401	one dimensional cartesian spatial coordinate datum		A one dimensional Cartesian spatial coordinate datum that is the eastward component of a distance from a point on a map projection.
http://purl.obolibrary.org/obo/OBI_0003067	northing coordinate measurement datum	http://purl.obolibrary.org/obo/IAO_0000401	one dimensional cartesian spatial coordinate datum		A one dimensional Cartesian spatial coordinate datum that is the northward component of a distance from a point on a map projection.
http://purl.obolibrary.org/obo/OBI_0003075	age since birth at time of enrollment	http://purl.obolibrary.org/obo/OBI_0001169	age since birth measurement datum		An age since birth measurement datum at the time of subject enrollment.
http://purl.obolibrary.org/obo/OBI_0003076	age since birth at time of visit	http://purl.obolibrary.org/obo/OBI_0001169	age since birth measurement datum		An age since birth measurement datum at the time of a clinical visit.
http://purl.obolibrary.org/obo/OBI_0003081	extraction date	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum		A time measurement datum that specifies when some material was extracted from an input material.
http://purl.obolibrary.org/obo/OBI_0003082	extraction duration time	http://purl.obolibrary.org/obo/IAO_0000416	time measurement datum		A time measurement datum that is the result of measuring the duration of an extraction process.
http://purl.obolibrary.org/obo/OBI_0003083	specimen collection time post disease onset	http://purl.obolibrary.org/obo/OBI_0001619	specimen collection time measurement datum		A specimen collection time measurement datum that is the measure of a time when specimens are collected after the onset of disease in a host.
http://purl.obolibrary.org/obo/OBI_0003084	specimen collection time post infection	http://purl.obolibrary.org/obo/OBI_0001619	specimen collection time measurement datum		A specimen collection time measurement datum that is the measure of a time when specimens are collected after an infection starts.
http://purl.obolibrary.org/obo/IAO_8000001	base ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module		An ontology module that comprises only of asserted axioms local to the ontology, excludes import directives, and excludes axioms or declarations from external ontologies.
http://purl.obolibrary.org/obo/IAO_8000003	main release ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module		An ontology module that is intended to be the primary release product and the one consumed by the majority of tools.
http://purl.obolibrary.org/obo/IAO_8000004	bridge ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module		An ontology module that consists entirely of axioms that connect or bridge two distinct ontology modules. For example, the Uberon-to-ZFA bridge module.
http://purl.obolibrary.org/obo/IAO_8000007	curation subset ontology module	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module		A subset ontology that is intended as a whitelist for curators using the ontology. Such a subset will exclude classes that curators should not use for curation.
http://purl.obolibrary.org/obo/IAO_8000008	analysis subset ontology module	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module		An ontology module that is intended for usage in analysis or discovery applications.
http://purl.obolibrary.org/obo/IAO_8000013	reasoned ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module		An ontology module that contains axioms generated by a reasoner. The generated axioms are typically direct SubClassOf axioms, but other possibilities are available.
http://purl.obolibrary.org/obo/IAO_8000014	generated ontology module	http://purl.obolibrary.org/obo/IAO_8000000	ontology module		An ontology module that is automatically generated, for example via a SPARQL query or via template and a CSV.
http://purl.obolibrary.org/obo/IAO_8000015	template generated ontology module	http://purl.obolibrary.org/obo/IAO_8000014	generated ontology module		An ontology module that is automatically generated from a template specification and fillers for slots in that template.
http://purl.obolibrary.org/obo/IAO_8000018	obo basic subset ontology module	http://purl.obolibrary.org/obo/IAO_8000017	ontology module subsetted by expressivity		A subset ontology that is designed for basic applications to continue to make certain simplifying assumptions; many of these simplifying assumptions were based on the initial version of the Gene Ontology, and have become enshrined in many popular and useful tools such as term enrichment tools.

Examples of such assumptions include: traversing the ontology graph ignoring relationship types using a naive algorithm will not lead to cycles (i.e. the ontology is a DAG); every referenced term is declared in the ontology (i.e. there are no dangling clauses).

An ontology is OBO Basic if and only if it has the following characteristics:
DAG
Unidirectional
No Dangling Clauses
Fully Asserted
Fully Labeled
No equivalence axioms
Singly labeled edges
No qualifier lists
No disjointness axioms
No owl-axioms header
No imports
http://purl.obolibrary.org/obo/OBI_0002776	cytometry analysis by automated gating	http://purl.obolibrary.org/obo/OBI_0200077	gating		A gating in which the output of a flow- or mass- cytometry experiment is separated into gates that were set by an algorithm in order to quantify the frequency of different cell populations of interest.
http://purl.obolibrary.org/obo/OBI_0003367	diagnosis of an organism	http://purl.obolibrary.org/obo/OBI_0001909	conclusion based on data		A conclusion based on data about that an organism has a disease, disorder, or syndrome of a certain type, or none of these.
http://purl.obolibrary.org/obo/OBI_0003380	placental blood specimen	http://purl.obolibrary.org/obo/OBI_2000009	bodily fluid specimen		A specimen that is derived from placental blood.
http://purl.obolibrary.org/obo/OBI_0003381	placental blood microbiology assay	http://purl.obolibrary.org/obo/OBI_0002649	blood microbiology assay		A blood microbiology assay that detects microorganisms in a placental blood specimen.
http://purl.obolibrary.org/obo/OBI_0003382	placental blood microbiology datum	http://purl.obolibrary.org/obo/OBI_0003244	blood microbiology datum		An organism detection datum that is the specified output of a placental blood microbiology assay.
http://purl.obolibrary.org/obo/OBI_0003383	eukaryota in placental blood datum	http://purl.obolibrary.org/obo/OBI_0003382	placental blood microbiology datum		A placental blood microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBCS_0000250	least square regression	http://purl.obolibrary.org/obo/OBI_0200102	regression analysis method		A regression analysis method that the overall solution minimizes the sum of the squares of the residuals made in the results of every single equation.
http://purl.obolibrary.org/obo/OBI_0003276	eukaryota in nasopharyngeal or oropharyngeal swab datum	http://purl.obolibrary.org/obo/OBI_0003257	nasopharyngeal or oropharyngeal swab microbiology datum		A nasopharyngeal or oropharyngeal swab microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003277	virus in nasopharyngeal or oropharyngeal swab datum	http://purl.obolibrary.org/obo/OBI_0003257	nasopharyngeal or oropharyngeal swab microbiology datum		A nasopharyngeal or oropharyngeal swab microbiology datum that is about a virus.
http://purl.obolibrary.org/obo/OBI_0003278	bacteria in pleural fluid datum	http://purl.obolibrary.org/obo/OBI_0003258	pleural fluid microbiology datum		A pleural fluid microbiology datum that is about bacteria.
http://purl.obolibrary.org/obo/OBI_0003279	eukaryota in pleural fluid datum	http://purl.obolibrary.org/obo/OBI_0003258	pleural fluid microbiology datum		A pleural fluid microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003280	virus in pleural fluid datum	http://purl.obolibrary.org/obo/OBI_0003258	pleural fluid microbiology datum		A pleural fluid microbiology datum that is about a virus.
http://purl.obolibrary.org/obo/OBI_0003281	eukaryota in umbilical cord blood datum	http://purl.obolibrary.org/obo/OBI_0003263	eukaryota in blood datum		An umbilical cord blood microbiology datum that is about eukaryota.
http://purl.obolibrary.org/obo/OBI_0003282	lung microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a lung specimen.
http://purl.obolibrary.org/obo/OBI_0003286	urine microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a urine specimen.
http://purl.obolibrary.org/obo/OBI_0002777	cytometry analysis by manual gating	http://purl.obolibrary.org/obo/OBI_0200077	gating		A gating in which the output of a flow- or mass- cytometry experiment is separated into gates that were set by a human operator in order to quantify the frequency of different cell populations of interest.
http://purl.obolibrary.org/obo/OBI_0003142	quantitative binding datum	http://purl.obolibrary.org/obo/OBI_0001181	binding datum		A binding datum that is expressed using numbers.
http://purl.obolibrary.org/obo/OBI_0003143	EC50 binding datum	http://purl.obolibrary.org/obo/OBI_0003142	quantitative binding datum		A quantitative binding datum that is expressed as a half-maximal effective concentration (EC50).
http://purl.obolibrary.org/obo/OBI_0003144	IC50 binding datum	http://purl.obolibrary.org/obo/OBI_0003142	quantitative binding datum		A quantitative binding datum that is expressed as a half-maximal inhibitory concentration (IC50).
http://purl.obolibrary.org/obo/OBI_0003295	positive binding datum	http://purl.obolibrary.org/obo/OBI_0003141	categorical binding datum		A categorical binding datum that states that there is a significant disposition of two or more entities to form a complex.
http://purl.obolibrary.org/obo/OBI_0003366	organism diagnostic process	http://purl.obolibrary.org/obo/OBI_0000338	drawing a conclusion based on data		A drawing a conclusion based on data that involves the interpretation of data about a given organism (human, animal, or plant) and the assertion to the effect that the organism has or had a disease, disorder, or syndrome of a certain type, or none of these as output.
http://purl.obolibrary.org/obo/OBI_0003328	magnetic resonance image data set	http://purl.obolibrary.org/obo/OBI_0003327	image data set		An image data set whose information content originates from some MR imaging assay and is about some MRI participant.
http://purl.obolibrary.org/obo/OBI_0003329	magnetic resonance imaging participant	http://purl.obolibrary.org/obo/BFO_0000040	material entity		The subject being scanned in an MRI study, and bearor of data derived from that study.
http://purl.obolibrary.org/obo/OBI_0003330	magnetic resonance imaging evaluant role	http://purl.obolibrary.org/obo/OBI_0000067	evaluant role		An evaluant role that inheres in a material entity that is realized in a MR imaging assay in which MR imaging data is generated about the bearer of the evaluant role.
http://purl.obolibrary.org/obo/OBI_0003331	raw image data set	http://purl.obolibrary.org/obo/OBI_0003327	image data set		An image data set that encodes measurement values produced by some instrument before undergoing a data transformation.
http://purl.obolibrary.org/obo/OBI_0003332	magnetic resonance pulse sequence protocol	http://purl.obolibrary.org/obo/OBI_0000272	protocol		The NMR/MRI machine protocol about the radiofrequency pulse sequence.
http://purl.obolibrary.org/obo/OBI_0003355	image data set analysis	http://purl.obolibrary.org/obo/OBI_0200000	data transformation		The process of deriving a data item from an image data set using computer algorithms. The produced data item can be an image data set, data measurement, or any other data item.
http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay	http://purl.obolibrary.org/obo/OBI_0000070	assay		An assay that detects a type of organism and/or the quantity of individuals of a type of organism.
http://purl.obolibrary.org/obo/OBI_0002197	tissue section thickness	http://purl.obolibrary.org/obo/IAO_0000408	length measurement datum		A length measurement datum that is the result of an assay measuring the thickness of a tissue section.
http://purl.obolibrary.org/obo/OBI_0002385	diagnosis of infectious disease	http://purl.obolibrary.org/obo/OGMS_0000073	diagnosis		A diagnosis that is an assertion that a patient who is the subject of a diagnostic process has an infectious disease.
http://purl.obolibrary.org/obo/OBI_0002386	diagnosis of hepatitis B	http://purl.obolibrary.org/obo/OBI_0002385	diagnosis of infectious disease		A diagnosis of infectious disease caused by the hepatitis B virus.
http://purl.obolibrary.org/obo/OBI_0002387	diagnosis of hepatitis C	http://purl.obolibrary.org/obo/OBI_0002385	diagnosis of infectious disease		A diagnosis of infectious disease caused by the hepatitis C virus.
http://purl.obolibrary.org/obo/OBI_0002388	diagnosis of HIV	http://purl.obolibrary.org/obo/OBI_0002385	diagnosis of infectious disease		A diagnosis of infectious disease caused by the human immunodeficiency virus (1 or 2).
http://purl.obolibrary.org/obo/OBI_0002394	number of pregnancies	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum of the total number of pregnancies a woman has had.
http://purl.obolibrary.org/obo/OBI_0002395	number of live births	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		A measurement datum of the total number of live births a female has had.
http://purl.obolibrary.org/obo/OBI_0002396	age when gave birth to first child	http://purl.obolibrary.org/obo/OBI_0001167	age measurement datum		An age measurement datum performed on a female when her first biological child was born.
http://purl.obolibrary.org/obo/STATO_0000524	Matthews correlation coefficient	http://purl.obolibrary.org/obo/STATO_0000142	correlation coefficient		Matthews Correlation Coefficient (or MCC) is a correlation coefficient which is a measure of the quality of binary (two-class) classifications, introduced by biochemist Brian W. Matthews in 1975.
http://purl.obolibrary.org/obo/OBI_0002649	blood microbiology assay	http://purl.obolibrary.org/obo/OBI_0003498	organism detection assay		An organism detection assay that detects microorganisms in a blood specimen.
http://purl.obolibrary.org/obo/OBI_0002599	swab specimen	http://purl.obolibrary.org/obo/OBI_0100051	specimen		A specimen that is stored on a swab as the output of a collecting specimen with swab process.
http://purl.obolibrary.org/obo/OBI_0002600	collecting specimen with swab	http://purl.obolibrary.org/obo/OBI_0000659	specimen collection process		A specimen collection process that uses a swab as the collection device. A swab is an absorbent material (e.g. cotton) on a rod (e.g., wooden stick).
http://purl.obolibrary.org/obo/OBI_0002601	demultiplexed sequence data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		Sequence data in which an identifier subsequence has been used to categorize each reads by source.
http://purl.obolibrary.org/obo/OBI_0002602	multiplexed sequence data	http://purl.obolibrary.org/obo/OBI_0000973	sequence data		Sequence data from a sequence library generated from at least two different sources, where each read in the sequence data includes base calls from a multiplex identifier sequence that can be used to trace the source of the read to its source.
http://purl.obolibrary.org/obo/OBI_0002606	nasopharyngeal swab specimen	http://purl.obolibrary.org/obo/OBI_0002599	swab specimen		A specimen that is collected with a swab from the surface of a nasopharynx.
http://purl.obolibrary.org/obo/OBI_0002608	oropharyngeal swab specimen	http://purl.obolibrary.org/obo/OBI_0002599	swab specimen		A specimen that is collected with a swab from the surface of a oropharynx.
http://purl.obolibrary.org/obo/OBI_0002983	altitude measurement datum	http://purl.obolibrary.org/obo/IAO_0000408	length measurement datum		A length measurement datum between a point at sea or ground level and some point above it.
http://purl.obolibrary.org/obo/OBCS_0000236	non-parametric test	http://purl.obolibrary.org/obo/OBI_0000673	statistical hypothesis test		A statistical hypothesis test that is not based on any parameterized family of probability distributions.
http://purl.obolibrary.org/obo/OBCS_0000238	Durbin test	http://purl.obolibrary.org/obo/OBCS_0000236	non-parametric test		A non-parametric test that was proposed by James Durbin and is used for for balanced incomplete designs.
http://purl.obolibrary.org/obo/OBCS_0000239	Friedman test	http://purl.obolibrary.org/obo/OBCS_0000238	Durbin test		A special case of the Durbin test that was proposed by Milton Frieman and is applicable to complete block designs. Friedman test detects the differences in treatments across multiple test attempts. The procedure involves ranking each row (or block) together, then considering the values of ranks by columns.
http://purl.obolibrary.org/obo/OGMS_0000123	clinical data item	http://purl.obolibrary.org/obo/IAO_0000027	data item		A data item that is about a patient and is the specified output of a health care process assay or diagnostic process
http://purl.obolibrary.org/obo/OBI_0002972	endotracheal aspirate specimen	http://purl.obolibrary.org/obo/OBI_0001479	specimen from organism		A specimen that derives from a biofilm that forms on the inner surface of an endotracheal tube while the tube is in the trachea. The specimen is collected by suction without removing the tube.
http://purl.obolibrary.org/obo/OBI_0003072	axillary temperature measurement datum	http://purl.obolibrary.org/obo/OBI_0003079	temperature measurement datum		A temperature measurement datum that is about an axilla.
http://purl.obolibrary.org/obo/OBI_0003073	organismal body temperature measurement datum	http://purl.obolibrary.org/obo/OBI_0003079	temperature measurement datum		A temperature measurement datum that is about an organism.
http://purl.obolibrary.org/obo/OBCS_0000257	decision making	http://purl.obolibrary.org/obo/OBCS_0000256	subjective process	决策	
http://purl.obolibrary.org/obo/OBCS_0000258	uncertainty analysis	http://purl.obolibrary.org/obo/OBI_0000011	planned process	不确定性分析	
http://purl.obolibrary.org/obo/OBCS_0000271	uncertainty elimination	http://purl.obolibrary.org/obo/BFO_0000015	process	不确定性消除	
http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	http://purl.obolibrary.org/obo/BFO_0000015	process	不确定性缘由	
http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	http://purl.obolibrary.org/obo/BFO_0000015	process	不确定性应对措施	
http://purl.obolibrary.org/obo/OBCS_0000275	multiple effects from single cause	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	单一原因的多重影响	
http://purl.obolibrary.org/obo/OBCS_0000276	individual difference	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	个体差异	
http://purl.obolibrary.org/obo/OBCS_0000277	material difficult to obtain	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	材料难以获取	
http://purl.obolibrary.org/obo/OBCS_0000278	instability of event (episodic, self-reversing, spreading)	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	事件不稳定（偶发、自我逆转、扩散）	
http://purl.obolibrary.org/obo/OBCS_0000279	partially available data	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	部分可用数据	
http://purl.obolibrary.org/obo/OBCS_0000280	diverse populations for study	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	研究人群不同	
http://purl.obolibrary.org/obo/OBCS_0000281	unclear boundaries of causal phenomena	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	因果现象界限不清	
http://purl.obolibrary.org/obo/OBCS_0000282	lack of causal model	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	缺乏因果模型	
http://purl.obolibrary.org/obo/OBCS_0000283	uncontrollable experimental condition	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不可控的实验条件	
http://purl.obolibrary.org/obo/OBCS_0000284	lack of information for comparison	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	缺乏可供比较的信息	
http://purl.obolibrary.org/obo/OBCS_0000285	labile and spreading symptom and side effect	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不稳定和不断扩散的症状和副作用	
http://purl.obolibrary.org/obo/OBCS_0000286	delayed information	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	延迟的信息	
http://purl.obolibrary.org/obo/OBCS_0000287	specialist/nonspecialist handling of the same case	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	同一案例的专业/非专业处理	
http://purl.obolibrary.org/obo/OBCS_0000288	unequal status between investigators	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	调查者间地位不平等	
http://purl.obolibrary.org/obo/OBCS_0000289	poor management-staff relation	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	管理层与员工关系不佳	
http://purl.obolibrary.org/obo/OBCS_0000290	lack of funding	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	资金不足	
http://purl.obolibrary.org/obo/OBCS_0000291	sporadic funding	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	资金分散	
http://purl.obolibrary.org/obo/OBCS_0000292	lack of institutional security	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	缺乏制度保障	
http://purl.obolibrary.org/obo/OBCS_0000293	delay and lack of communication between investigators	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	调查人员间的延误和缺乏沟通	
http://purl.obolibrary.org/obo/OBCS_0000295	operative complication (experimental)	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	手术并发症（实验性）	
http://purl.obolibrary.org/obo/OBCS_0000296	uncontrollable procedure	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	无法控制的程序	
http://purl.obolibrary.org/obo/OBCS_0000297	observational difficulty	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	观察困难	
http://purl.obolibrary.org/obo/OBCS_0000298	order data sequentially or by spatial location	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	按顺序或空间位置对数据进行排序	
http://purl.obolibrary.org/obo/OBCS_0000299	standardize	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	标准化	
http://purl.obolibrary.org/obo/OBCS_0000300	find exemplars-filter for clear-cut case	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	范例筛选	
http://purl.obolibrary.org/obo/OBCS_0000301	segmentation of uncertainty	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	不确定性分割	
http://purl.obolibrary.org/obo/OBCS_0000302	substitution of taxonomy for diagnosis	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	诊断分类替代	
http://purl.obolibrary.org/obo/OBCS_0000303	division of labor	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	劳动分工	
http://purl.obolibrary.org/obo/OBCS_0000304	search for pathognomonic sign	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	寻找病症	
http://purl.obolibrary.org/obo/OBCS_0000305	shotgun treatment	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	散弹枪疗法	
http://purl.obolibrary.org/obo/OBCS_0000306	division of data along political line for clarity	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	按照政治路线清晰划分数据	
http://purl.obolibrary.org/obo/OBCS_0000307	division of labor along technical/substantive line	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	按照技术/实质性原则分工	
http://purl.obolibrary.org/obo/OBCS_0000308	observations limited to available material	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	观察限于现有材料	
http://purl.obolibrary.org/obo/OBCS_0000309	utilitarian emphasis on practical result	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	强调实际结果的功利主义	
http://purl.obolibrary.org/obo/OBCS_0000310	standardization of techniques and material	http://purl.obolibrary.org/obo/OBCS_0000299	standardize	技术和材料标准化	
http://purl.obolibrary.org/obo/OBCS_0000311	standardization of observational technique (form) and protocol	http://purl.obolibrary.org/obo/OBCS_0000299	standardize	观察技术（形式）和协议标准化	
http://purl.obolibrary.org/obo/OBCS_0000312	observations down-focused to smaller area	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	观察向下聚焦到更小的领域	
http://purl.obolibrary.org/obo/OBCS_0000313	substitution of theoretical validity for technical consistency	http://purl.obolibrary.org/obo/OBCS_0000273	uncertainty response activity	用理论有效性替代技术一致性	
http://purl.obolibrary.org/obo/OBCS_0000314	measurement error	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	测量误差	
http://purl.obolibrary.org/obo/OBCS_0000315	incomplete knowledge	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不完整的知识	
http://purl.obolibrary.org/obo/OBCS_0000316	limited understanding	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	有限的理解	
http://purl.obolibrary.org/obo/OBCS_0000317	imperfect model	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	不完美的模型	
http://purl.obolibrary.org/obo/OBCS_0000318	subjective judgement	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition	主观判断	
http://purl.obolibrary.org/obo/OBCS_0000324	probability	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	可能	
http://purl.obolibrary.org/obo/OBCS_0000325	complexity-induced uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	复杂引起的不确定性	
http://purl.obolibrary.org/obo/OBCS_0000332	prognosis uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	预后不确定性	
http://purl.obolibrary.org/obo/OBCS_0000333	positive or neutral certainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	确定性（正面或中性）	
http://purl.obolibrary.org/obo/OBCS_0000334	detrimental certainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	确定性（有害的）	
http://purl.obolibrary.org/obo/OBCS_0000335	moderate degree of certainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	中等不确定性	
http://purl.obolibrary.org/obo/OBCS_0000336	detrimental uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	不确定性（有害的）	
http://purl.obolibrary.org/obo/OBCS_0000337	positive uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	不确定性（正面）	
http://purl.obolibrary.org/obo/OBCS_0000350	input uncertainty	http://purl.obolibrary.org/obo/OBCS_0000251	uncertainty	输入不确定性	
http://purl.obolibrary.org/obo/OBCS_0000353	parameters uncertainty	http://purl.obolibrary.org/obo/OBCS_0000252	objective uncertainty	参数不确定性	
http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty	http://purl.obolibrary.org/obo/OBCS_0000253	subjective uncertainty	identity disorder	
http://purl.obolibrary.org/obo/OBCS_0000368	definitive certainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	绝对确定	
http://purl.obolibrary.org/obo/OBCS_0000369	high certainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	高度确定	
http://purl.obolibrary.org/obo/OBCS_0000370	intermediate certainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	中度确定	
http://purl.obolibrary.org/obo/OBCS_0000371	highest uncertainty degree	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	最高程度不确定	
http://purl.obolibrary.org/obo/OBCS_0000372	very high uncertainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	非常高度不确定	
http://purl.obolibrary.org/obo/OBCS_0000373	low uncertainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	低程度不确定	
http://purl.obolibrary.org/obo/OBCS_0000374	very low uncertainty level	http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	非常低程度不确定	
http://purl.obolibrary.org/obo/BFO_0000148	zero-dimensional temporal region	http://purl.obolibrary.org/obo/BFO_0000008	temporal region	temporal instant.	
http://purl.obolibrary.org/obo/IAO_8000000	ontology module	http://purl.obolibrary.org/obo/IAO_0000102	data about an ontology part	ontology file	
http://purl.obolibrary.org/obo/IAO_8000017	ontology module subsetted by expressivity	http://purl.obolibrary.org/obo/IAO_8000006	subset ontology module		
http://purl.obolibrary.org/obo/OBCS_0000262	screening sensitivity analysis	http://purl.obolibrary.org/obo/OBCS_0000259	sensitivity analysis		
http://purl.obolibrary.org/obo/OBCS_0000294	reacting subject	http://purl.obolibrary.org/obo/OBCS_0000272	uncertainty arise condition		
http://purl.obolibrary.org/obo/OBCS_0000364	uncertainty about gender role	http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty		
http://purl.obolibrary.org/obo/OBCS_0000365	uncertainty about long-term goal	http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty		
http://purl.obolibrary.org/obo/OBCS_0000366	uncertainty about value system	http://purl.obolibrary.org/obo/OBCS_0000363	identity uncertainty		
http://purl.obolibrary.org/obo/BFO_0000008	temporal region	http://purl.obolibrary.org/obo/BFO_0000003	occurrent		
http://purl.obolibrary.org/obo/BFO_0000011	spatiotemporal region	http://purl.obolibrary.org/obo/BFO_0000003	occurrent		
http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity	http://purl.obolibrary.org/obo/BFO_0000004	independent continuant		
http://purl.obolibrary.org/obo/BFO_0000009	two-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/BFO_0000018	zero-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/BFO_0000026	one-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/BFO_0000028	three-dimensional spatial region	http://purl.obolibrary.org/obo/BFO_0000006	spatial region		
http://purl.obolibrary.org/obo/BFO_0000038	one-dimensional temporal region	http://purl.obolibrary.org/obo/BFO_0000008	temporal region		
http://purl.obolibrary.org/obo/BFO_0000182	history	http://purl.obolibrary.org/obo/BFO_0000015	process		
http://purl.obolibrary.org/obo/BFO_0000034	function	http://purl.obolibrary.org/obo/BFO_0000016	disposition		
http://purl.obolibrary.org/obo/BFO_0000016	disposition	http://purl.obolibrary.org/obo/BFO_0000017	realizable entity		
http://purl.obolibrary.org/obo/BFO_0000019	quality	http://purl.obolibrary.org/obo/BFO_0000020	specifically dependent continuant		
http://purl.obolibrary.org/obo/BFO_0000024	fiat object part	http://purl.obolibrary.org/obo/BFO_0000040	material entity		
http://purl.obolibrary.org/obo/BFO_0000027	object aggregate	http://purl.obolibrary.org/obo/BFO_0000040	material entity		
http://purl.obolibrary.org/obo/BFO_0000030	object	http://purl.obolibrary.org/obo/BFO_0000040	material entity		
http://purl.obolibrary.org/obo/BFO_0000142	one-dimensional continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary		
http://purl.obolibrary.org/obo/BFO_0000146	two-dimensional continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary		
http://purl.obolibrary.org/obo/BFO_0000147	zero-dimensional continuant fiat boundary	http://purl.obolibrary.org/obo/BFO_0000140	continuant fiat boundary		
http://purl.obolibrary.org/obo/BFO_0000006	spatial region	http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity		
http://purl.obolibrary.org/obo/BFO_0000029	site	http://purl.obolibrary.org/obo/BFO_0000141	immaterial entity		
http://purl.obolibrary.org/obo/UO_0000001	length unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/UO_0000002	mass unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/UO_0000003	time unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/UO_0000005	temperature unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/UO_0000051	concentration unit	http://purl.obolibrary.org/obo/IAO_0000003	measurement unit label		
http://purl.obolibrary.org/obo/OBCS_0000367	uncertainty degree level	http://purl.obolibrary.org/obo/IAO_0000027	data item		
http://purl.obolibrary.org/obo/IAO_0000057	contour plot	http://purl.obolibrary.org/obo/IAO_0000038	graph		
http://purl.obolibrary.org/obo/IAO_0000582	time stamped measurement datum	http://purl.obolibrary.org/obo/IAO_0000109	measurement datum		
http://purl.obolibrary.org/obo/NCBITaxon_10239	Viruses	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/NCBITaxon_2157	Archaea	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/NCBITaxon_2	Bacteria	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/NCBITaxon_2759	Eukaryota	http://purl.obolibrary.org/obo/OBI_0100026	organism		
http://purl.obolibrary.org/obo/OBCS_0000020	hierarchical linear model	http://purl.obolibrary.org/obo/OBCS_0000035	statistical model		
http://purl.obolibrary.org/obo/UBERON_0013522	subdivision of tube	http://purl.obolibrary.org/obo/UBERON_0000064	organ part		
http://purl.obolibrary.org/obo/IAO_8000016	taxonomic bridge ontology module	http://purl.obolibrary.org/obo/IAO_8000004	bridge ontology module		
http://purl.obolibrary.org/obo/IAO_8000019	ontology module subsetted by OWL profile	http://purl.obolibrary.org/obo/IAO_8000017	ontology module subsetted by expressivity		
http://purl.obolibrary.org/obo/IAO_8000020	EL++ ontology module	http://purl.obolibrary.org/obo/IAO_8000019	ontology module subsetted by OWL profile		
http://purl.obolibrary.org/obo/BFO_0000001	entity				
http://purl.obolibrary.org/obo/RO_0000079	function of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of	is function of	a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/RO_0000080	quality of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of	quality_of	a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/RO_0000085	has function	http://purl.obolibrary.org/obo/RO_0000053	has characteristic	has_function	a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/RO_0000086	has quality	http://purl.obolibrary.org/obo/RO_0000053	has characteristic	has_quality	a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/RO_0002350	member of	http://purl.obolibrary.org/obo/BFO_0000050	part of	member part of	is member of is a mereological relation between a item and a collection.
http://purl.obolibrary.org/obo/RO_0000087	has role	http://purl.obolibrary.org/obo/RO_0000053	has characteristic	has_role	a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/BFO_0000062	preceded by	http://purl.obolibrary.org/obo/RO_0002086	ends after	preceded_by	x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
http://purl.obolibrary.org/obo/RO_0000081	role of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of	role_of	a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/BFO_0000063	precedes	http://purl.obolibrary.org/obo/RO_0002222	temporally related to		x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.
http://purl.obolibrary.org/obo/IAO_0000219	denotes	http://purl.obolibrary.org/obo/IAO_0000136	is about		A primitive, instance-level, relation obtaining between an information content entity and some portion of reality. Denotation is what happens when someone creates an information content entity E in order to specifically refer to something. The only relation between E and the thing is that E can be used to 'pick out' the thing. This relation connects those two together. Freedictionary.com sense 3: To signify directly; refer to specifically
http://purl.obolibrary.org/obo/IAO_0000221	is quality measurement of	http://purl.obolibrary.org/obo/IAO_0000136	is about		m is a quality measurement of q at t. When q is a quality, there is a measurement process p that has specified output m, a measurement datum, that is about q
http://purl.obolibrary.org/obo/IAO_0000413	is duration of	http://purl.obolibrary.org/obo/IAO_0000136	is about		relates a process to a time-measurement-datum that represents the duration of the process
http://purl.obolibrary.org/obo/IAO_0000581	has time stamp	http://purl.obolibrary.org/obo/BFO_0000051	has part		relates a time stamped measurement datum to the time measurement datum that denotes the time when the measurement was taken
http://purl.obolibrary.org/obo/IAO_0000583	has measurement datum	http://purl.obolibrary.org/obo/BFO_0000051	has part		relates a time stamped measurement datum to the measurement datum that was measured
http://purl.obolibrary.org/obo/OBI_0000293	has_specified_input	http://purl.obolibrary.org/obo/RO_0000057	has participant		The inverse property of is_specified_input_of
http://purl.obolibrary.org/obo/OBI_0000295	is_specified_input_of	http://purl.obolibrary.org/obo/RO_0000056	participates in		A relation between a planned process and a continuant participating in that process that is not created during  the process. The presence of the continuant during the process is explicitly specified in the plan specification which the process realizes the concretization of.
http://purl.obolibrary.org/obo/OBI_0000299	has_specified_output	http://purl.obolibrary.org/obo/RO_0000057	has participant		The inverse property of is_specified_output_of
http://purl.obolibrary.org/obo/OBI_0000312	is_specified_output_of	http://purl.obolibrary.org/obo/RO_0000056	participates in		A relation between a planned process and a continuant participating in that process. The presence of the continuant at the end of the process is explicitly specified in the objective specification which the process realizes the concretization of.
http://purl.obolibrary.org/obo/OBI_0000643	has grain	http://purl.obolibrary.org/obo/BFO_0000051	has part		the relation of the cells in the finger of the skin to the finger, in which an indeterminate number of grains are parts of the whole by virtue of being grains in a collective that is part of the whole, and in which removing one granular part does not nec- essarily damage or diminish the whole. Ontological Whether there is a fixed, or nearly fixed number of parts - e.g. fingers of the hand, chambers of the heart, or wheels of a car - such that there can be a notion of a single one being missing, or whether, by contrast, the number of parts is indeterminate - e.g., cells in the skin of the hand, red cells in blood, or rubber molecules in the tread of the tire of the wheel of the car.
http://purl.obolibrary.org/obo/OBI_0000999	has category label	http://purl.obolibrary.org/obo/BFO_0000051	has part		A relation between a categorical measurement data item and the categorical label that indicates the value of that data item on the categorical scale.
http://purl.obolibrary.org/obo/OBI_0001937	has specified numeric value	http://purl.obolibrary.org/obo/OBI_0002135	has specified value		A relation between a value specification and a number that quantifies it.
http://purl.obolibrary.org/obo/OBI_0001938	has value specification	http://purl.obolibrary.org/obo/BFO_0000051	has part		A relation between an information content entity and a value specification that specifies its value.
http://purl.obolibrary.org/obo/RO_0002223	starts	http://purl.obolibrary.org/obo/BFO_0000050	part of		inverse of starts with
http://purl.obolibrary.org/obo/RO_0002351	has member	http://purl.obolibrary.org/obo/BFO_0000051	has part		has member is a mereological relation between a collection and an item.
http://purl.obolibrary.org/obo/RO_0000091	has disposition	http://purl.obolibrary.org/obo/RO_0000053	has characteristic		a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence
http://purl.obolibrary.org/obo/RO_0002087	immediately preceded by	http://purl.obolibrary.org/obo/BFO_0000062	preceded by	starts_at_end_of	
http://purl.obolibrary.org/obo/RO_0002091	starts during	http://purl.obolibrary.org/obo/RO_0002222	temporally related to	io	
http://purl.obolibrary.org/obo/RO_0002092	happens during	http://purl.obolibrary.org/obo/RO_0002093	ends during	during	
http://purl.obolibrary.org/obo/RO_0002093	ends during	http://purl.obolibrary.org/obo/RO_0002222	temporally related to	overlaps	
http://purl.obolibrary.org/obo/RO_0000092	disposition of	http://purl.obolibrary.org/obo/RO_0000052	characteristic of		
http://purl.obolibrary.org/obo/IAO_0000407	has coordinate unit label	http://purl.obolibrary.org/obo/BFO_0000051	has part		
http://purl.obolibrary.org/obo/IAO_0000039	has measurement unit label	http://purl.obolibrary.org/obo/BFO_0000051	has part		
http://purl.obolibrary.org/obo/RO_0002086	ends after	http://purl.obolibrary.org/obo/RO_0002222	temporally related to		
http://purl.obolibrary.org/obo/RO_0000052	characteristic of			inheres_in	a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.
http://purl.obolibrary.org/obo/RO_0000053	has characteristic			is bearer of	Inverse of characteristic_of
http://purl.obolibrary.org/obo/RO_0000056	participates in			participates_in	a relation between a continuant and a process, in which the continuant is somehow involved in the process
http://purl.obolibrary.org/obo/RO_0000057	has participant			has_participant	a relation between a process and a continuant, in which the continuant is somehow involved in the process
http://purl.obolibrary.org/obo/RO_0001000	derives from			derives_from	a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity
http://purl.obolibrary.org/obo/RO_0001001	derives into			derives_into	a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity
http://purl.obolibrary.org/obo/RO_0001015	location of			location_of	a relation between two independent continuants, the location and the target, in which the target is entirely within the location
http://purl.obolibrary.org/obo/RO_0002000	2D boundary of			is boundary of	a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity
http://purl.obolibrary.org/obo/RO_0002002	has 2D boundary			has_2D_boundary	a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity
http://purl.obolibrary.org/obo/RO_0001025	located in			located_in	a relation between two independent continuants, the target and the location, in which the target is entirely within the location
http://purl.obolibrary.org/obo/BFO_0000051	has part			has_part	a core relation that holds between a whole and its part
http://purl.obolibrary.org/obo/BFO_0000050	part of			part_of	a core relation that holds between a part and its whole
http://purl.obolibrary.org/obo/BFO_0000066	occurs in			unfolds_in	b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
http://purl.obolibrary.org/obo/OBI_0002135	has specified value				A relation between a value specification and a literal.
http://purl.obolibrary.org/obo/BFO_0000067	contains process				[copied from inverse property 'occurs in'] b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t
http://purl.obolibrary.org/obo/IAO_0000136	is about				A (currently) primitive relation that relates an information artifact to an entity.
http://purl.obolibrary.org/obo/IAO_0000417	is quality measured as				inverse of the relation of is quality measurement of
http://purl.obolibrary.org/obo/OBI_0000124	is_supported_by_data				The relation between a data item and a conclusion where the conclusion is the output of a data interpreting process and the data item is used as an input to that process
http://purl.obolibrary.org/obo/OBI_0000292	has_feature_value				has_feature_value datatype property is used to describe the feature values which the feature class can contain, for example has_base can have feature values of nonNegativeInteger values.
http://purl.obolibrary.org/obo/OBI_0000417	achieves_planned_objective				This relation obtains between a planned process and a objective specification when the criteria specified in the objective specification are met at the end of the planned process.
http://purl.obolibrary.org/obo/OBI_0000833	objective_achieved_by				This relation obtains between an objective specification and a planned process when the criteria specified in the objective specification are met at the end of the planned process.
http://purl.obolibrary.org/obo/RO_0000058	is concretized as				A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.
http://purl.obolibrary.org/obo/RO_0000059	concretizes				A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.
http://purl.obolibrary.org/obo/OBCS_0000223	has probability distribution				A relation between a data set and a probability distribution.
http://purl.obolibrary.org/obo/OBCS_0000227	has probability density function				A relation between a probability distribution and probability.
http://purl.obolibrary.org/obo/OBCS_0000237	test follows probability distribution				An object property that represents a relation between a statistical test and a probability distribution.
http://purl.obolibrary.org/obo/IAO_0000235	denoted by				inverse of the relation 'denotes'
http://purl.obolibrary.org/obo/BFO_0000054	realized in			realized_in	
http://purl.obolibrary.org/obo/BFO_0000055	realizes				
http://purl.obolibrary.org/obo/IAO_0000004	has measurement value				
http://purl.obolibrary.org/obo/IAO_0000404	has x coordinate value				
http://purl.obolibrary.org/obo/IAO_0000405	has z coordinate value				
http://purl.obolibrary.org/obo/IAO_0000406	has y coordinate value				
http://purl.obolibrary.org/obo/RO_0004096	DEPRECATED inheres in				
http://purl.obolibrary.org/obo/RO_0004097	DEPRECATED bearer of				
http://purl.obolibrary.org/obo/RO_0002222	temporally related to